Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0020 |
Symbol | truA |
ID | 3932291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 17293 |
End bp | 18024 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637900177 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_505923 |
Protein GI | 88608581 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTACA AGGCAATAGT TGAATATGTT GGTACTGGTT TTTCTGGCTG GCAGAAACAA ATGTCCGCTC CATCTGTGCA GGAAGAGTTG GAATCAGTCC TCAGTTTTTT GTTAAAGGAG AAAATAGCAG TTAATGTTGC TGGAAGAACA GATGCAGGAG TGCACGCTCT CGGACAGGTC TTTCATTTTG ATGCACGTGA ATCTACTTTG CAGCCTTTTC AAATAGTAAA TGCGGTAAAT TATCATTTGA AAGAGAAGTT AATAGTTCTG CTGAAGATAG AGATTGTTGA TGAAACCTTT GATGCCAGAT TTTCTGCTAT TAGGAGACAC TATCAATACA AAATCACAAA CAGAAAGACA CCACTGGCAG TATTTAAAAA CCGCTCCTGG CATGTGCCGC AGACTTTAAA TCTGGATCTC ATTAGGGAGC AAGCTCAATA TCTTGTTGGA AAACACGATT TTCAGAGTTT TCGTTCATCC AAATGTGGTG CTTCTAACGC TATTAGGACC CTAGATAGGT TGGAAGTTGA GAAAAACGGA GAGGAAATGA TTTTTCATGC CTCTGCTAAG TCGTTTTTGC ATCATCAGGT GCGGATAATG GTTGGTACTT TGGTTGCCAT TGCATCTGGA AAACTCATGA GTGTTACAGA AATTCTCTCT AAGAAGAATC GTCGTTACGC TGGCCCGACT GCTCCTCCAT GTGGTTTATA TCTCCTGAAA GTGGATTATT AG
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Protein sequence | MRYKAIVEYV GTGFSGWQKQ MSAPSVQEEL ESVLSFLLKE KIAVNVAGRT DAGVHALGQV FHFDARESTL QPFQIVNAVN YHLKEKLIVL LKIEIVDETF DARFSAIRRH YQYKITNRKT PLAVFKNRSW HVPQTLNLDL IREQAQYLVG KHDFQSFRSS KCGASNAIRT LDRLEVEKNG EEMIFHASAK SFLHHQVRIM VGTLVAIASG KLMSVTEILS KKNRRYAGPT APPCGLYLLK VDY
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