Gene NSE_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0001 
Symbol 
ID3932296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp
End bp774 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content36% 
IMG OID637900158 
ProductParB family chromosome partitioning protein 
Protein accessionYP_505904 
Protein GI88608392 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0794008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAA ATGAGAATAT CGTTCATTTA AAGTTAAATG AGGTAGATGT AAATGATTTT 
CAGCCTCGTA AAGTTTTCGA TGAGGCGTCT ATTGCAGAAT TGGAAGAATC TATCAAGAGA
AATGGCTTGA TACAGCCGAT AATAGTTAGA AAATTTGGTG AAAGATACAA GCTAATTGCT
GGTGAAAGAC GTCTTAGAGC TATGAGAAAC TTGGGAGCGG AAACGATCCC ATCTATTGTT
AGGGACTTTA CAGATAAGAC TTCCCTTGAA GTTGCTATAG TAGAAAATAT ACAGAGAAAG
GATTTAACGC CATTAGAAGA AGCAGAGGCA TACAAAAGAC TCATCGACGA ATTTAATTAT
AAGCATGTAG AGTTGGCAAG TATAGTTGGT AAAAGTCGAT CTCATGTTAC AAACCATCTC
AGGATACTTT CTTTACCAAA GAGAATAAAA GAACTTTTAG AAGAAAATAG AATCTCGCTT
GGGCATGTTA AGTTACTAAC GAATGTGGAA GATAGCGAGA AAATGGCGGA AAAGATAGCT
CGCCTCTCAC TAAGTGTAAG ACAAGCTGAA AACCTCTTGA GGGATGCGCG CAAAAAAAAT
AACCCTCATG CAAATAAGAA AAGTCATGAA CTATGTATGT TGGAAAAAAA AATTTCAGAG
AGGTTAGGGA TGAAAGTAAC AATAACTGAC AGTGAAAGGA AAAATGGAAA TGTTAAAATT
ACCTTTAAAA ACTTAGATGA GCTCCAGGAT ATTCTAGAGA GACTAAGTTA A
 
Protein sequence
MRLNENIVHL KLNEVDVNDF QPRKVFDEAS IAELEESIKR NGLIQPIIVR KFGERYKLIA 
GERRLRAMRN LGAETIPSIV RDFTDKTSLE VAIVENIQRK DLTPLEEAEA YKRLIDEFNY
KHVELASIVG KSRSHVTNHL RILSLPKRIK ELLEENRISL GHVKLLTNVE DSEKMAEKIA
RLSLSVRQAE NLLRDARKKN NPHANKKSHE LCMLEKKISE RLGMKVTITD SERKNGNVKI
TFKNLDELQD ILERLS