Gene Mhun_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3218 
Symbol 
ID3922271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3520458 
End bp3521324 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content50% 
IMG OID637898833 
ProductHhH-GPD 
Protein accessionYP_504619 
Protein GI88604441 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGATT TTATGGACGA ATTTTTTGAC TCTGCTGATC CTGCATCAAT AGACCGGTTC 
AATGCAATGC TTTCAGAGTT TTATGTGAAG AACCGGCGCC CCATGCCCTG GAGGGATGAG
ATCACACCGT ACCGGGTCGT TGTATCCGAG ATCATGCTGC AGCAGACCCA GGTCCCCCGC
GTCCTGAAAA AGTTTGATGA GTTTATCAGG ATATTCCCTG ATTTTGCGGC TCTTGCACAG
GCATCACTTG AGGATGTCCT ACGGGCATGG CAGGGTCTTG GTTATAATCG GCGGGCAAAA
TACCTTCTTC AGATTGCGCA GGTGATAATA AACCGGTGGG ACGGAATTGT CCCTGAAGAT
CCTGCCGTAT TACAGACTCT CCCTGGCATA GGCGCAGCAA CAGCAGGATC AATCGTTGTG
TTCATTTATG ACCGCCCGGT AGTATTCATT GAAACAAATG TACGCCGGGT ATTTATTCAC
CATTTTTTTC AGGACCGGGT GGGGGTATCT GATATGGAGA TATATCCGGT GCTTACCTGG
ACCCTTGACC ACAATCATCC CCGGGAATGG TATTACAGCA TCATGGACTA TGGGACATTT
CTTGCGGGAG CTATAGAAAA TCCGAACCGT CGGAGCAGGC ATTATGCGGT GCAATCAAAG
TTCTCCGGGA GTGATCGGGA GATCAGGGGC AGGATCCTGA AAGTATTGTT GGCTGAGGGC
CCTGTATTGG GTGACCTCAT CTCTCAGAAG ATTCAGAGTG AGGAGGAGCG GACAACTAGG
ATCCTCGGGC AGATGGTAGA TGAAGGCCTT TTGATGAGGG ATGGAGTTCT GATCCGCTTT
CCTGACAATG AAAGCCGGAC TCCATAA
 
Protein sequence
MTDFMDEFFD SADPASIDRF NAMLSEFYVK NRRPMPWRDE ITPYRVVVSE IMLQQTQVPR 
VLKKFDEFIR IFPDFAALAQ ASLEDVLRAW QGLGYNRRAK YLLQIAQVII NRWDGIVPED
PAVLQTLPGI GAATAGSIVV FIYDRPVVFI ETNVRRVFIH HFFQDRVGVS DMEIYPVLTW
TLDHNHPREW YYSIMDYGTF LAGAIENPNR RSRHYAVQSK FSGSDREIRG RILKVLLAEG
PVLGDLISQK IQSEEERTTR ILGQMVDEGL LMRDGVLIRF PDNESRTP