| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3132 |
|---|
| Symbol | |
|---|
| ID | 3923960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3417886 |
|---|
| End bp | 3418290 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898741 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_504537 |
|---|
| Protein GI | 88604359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.112593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000898611 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA ATTCAACCCA CAAATTCCTT AGCAAGCGTG ATGTTCTCCT CAATAAGGCT
GATGCATTTG CATTGGAGGC AGATCAACTG GCATACCAGG GGAAGTACGA GGAAGCGGTG
GACAAATATG ATCAGGCGCT CGCAATATAT CCGTCCAACC CTGATCTCTG GGCATTTAAG
GCCATCACAC TCTCCGGTGG CCTGGGGAGA AATGAGGAGG CGCTCGAATG CTGGGAACGG
GCGAAGAAAC TGGATCATGT GTTAGCGGAT GCAATCACCG ATGTACCTTC ATCTGAAACG
ACCATGACTG TGCATGAACG GGACCTTGTG GATTTCAAGG GGAGCACTGC GGATAGGATC
CGAAACCTGG TCAAGCAGCA GGCGATGGAT AAGAAGAAGA AATAA
|
|---|
| Protein sequence | MAENSTHKFL SKRDVLLNKA DAFALEADQL AYQGKYEEAV DKYDQALAIY PSNPDLWAFK
AITLSGGLGR NEEALECWER AKKLDHVLAD AITDVPSSET TMTVHERDLV DFKGSTADRI
RNLVKQQAMD KKKK
|
|---|
| |