Gene Mhun_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2978 
Symbol 
ID3922461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3255875 
End bp3257092 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID637898587 
Producthypothetical protein 
Protein accessionYP_504384 
Protein GI88604206 
COG category[S] Function unknown 
COG ID[COG1900] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03287] putative methanogenesis marker 16 metalloprotein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAA TCGATGAGAT CCGGACTGCT CTTGCCGATG GTTCTGCAGT TATCCTGACG 
GCATCGGAGT TGAAGAAAAG AATTACACAG GGAGATACCG TCTCTGATGT TGATGTTGTC
ACCTGTGGGA CCTGCGGGGT CATGTCAGGC ACATATGCGG TCCTGTCAGT CCCGGTTGCT
CCTCCCGGTA CCTTTTCACG AGCAGATACT ATCTCACTGA ATGGGGTGCC GGCAATTCCC
GGCCCCTGCC CGAATGAACG ACTGGGACTT GTTGATCTGA TGGTATTCGG GACCGCCCAT
GCAGATGACC GGTACGGAGG CGGACATCTC TTCCATGACC TTATTGCCGG AGAAGAGATT
CATATCGCAG TTACCTCGGC CGGAAAGGAC TATGAGGCAT ATGTAACCCT TTCTGACCTC
CCGTTTGCCC GGTTATTTAC TACCCGGAGT GCGTTTAAGA ACTACTCTGC AATCATCAAT
CAGAGCAGCG GACCGGTAAA GACCATATTT TCTGCCCTGC CACTTCAGGG CACCAGCACA
CAGGCTACCG TCTCCGGATG CGGGGAGATA AACCCGGTAG AAAATGATCC AACCCTCCGG
TTCCTCTCTG CCGGTTCTCC AGTGATCCTA AACGGGGCTG GTGGCCGGGT GATCGGAACC
GGAACCCGGA GTTCTCCTTA TCGGCCCAAT CTCTCTGTCC ATGCCGACCT GAAGGAGATG
GATGCACATT TTTGTGGCGG TTTTCGTACC GCTGCAGGGC CTGAGTGCAT AACCAGCATC
GGGACCGCGA TTCCGGTTGT TGACACGGAT GTCCTCAGCT CCCTTTCTGT CCTGGATTGT
GATATCGCCA TGCCGGTTGT GGATATCAGT GATCGTCAGC CGGTTGGGAC TGCCTCGTAT
GAACAGGTGT GGACCGGAAC TGCAACACGG GTCTTGTATC ATCCGGAGCG ATGTCTTCAC
TGTTCTCCCT GTGATGCCAG AACTGCATGT CCAGTTGATG CAATCCGGGA AGATGGGACG
ATCAATCAGA CGCAGTGCTT TGTGTGCGGA ACCTGTGTGC AGATCTGCAA GGGTTCGGTA
TATGAAGGAA ATTTTGGTTC TATCACGTAT GAAGGAGCTG GCATTCCGAT TGTTCTCCGG
CAGTCTGACC GGAGAAGAGC AGAGATACTC TGCAGAAGAG TGCGGGATAT GCTGGTCAGG
GGTGAATTTC AGATATGA
 
Protein sequence
MRSIDEIRTA LADGSAVILT ASELKKRITQ GDTVSDVDVV TCGTCGVMSG TYAVLSVPVA 
PPGTFSRADT ISLNGVPAIP GPCPNERLGL VDLMVFGTAH ADDRYGGGHL FHDLIAGEEI
HIAVTSAGKD YEAYVTLSDL PFARLFTTRS AFKNYSAIIN QSSGPVKTIF SALPLQGTST
QATVSGCGEI NPVENDPTLR FLSAGSPVIL NGAGGRVIGT GTRSSPYRPN LSVHADLKEM
DAHFCGGFRT AAGPECITSI GTAIPVVDTD VLSSLSVLDC DIAMPVVDIS DRQPVGTASY
EQVWTGTATR VLYHPERCLH CSPCDARTAC PVDAIREDGT INQTQCFVCG TCVQICKGSV
YEGNFGSITY EGAGIPIVLR QSDRRRAEIL CRRVRDMLVR GEFQI