Gene Mhun_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2905 
Symbol 
ID3924855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3182560 
End bp3183318 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content51% 
IMG OID637898519 
ProductXRE family transcriptional regulator 
Protein accessionYP_504316 
Protein GI88604138 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTT CAGATCTGAT GTCTACACCG GTCCATGCCG CAAAGCCGGG TGATACCGTC 
TCACATGCAC GAAATCTGAT GCTCAGGCAT AAGATATCCA GGGTTCTTGT TGTTGATGAA
GGTCGCGCAC GAGGAATCAT CACAAAGAAG GATATCGGGT TTCGTCTGCG GAAGAATGAT
CCAGACTGGC GGTATCGGAA GATGGACAGT GCCCCCCTGA GTCAGGTGAT GAGTACTGAT
CTGGTGAGTT TATCCCCAGA TAGCAGCATC CGTGATGCGC TCCTCCTCCT GGTCAGTCAT
GAGATCTCGG GAGCACCGGT TATTGATCAG GGGATGGTTC TGGGCATTCT GACCAGGACT
GACATTTTGC GCTCACATCT GGTCGCACAA CTGGATATTC CGGTCCATGA GATAATGCAT
GAACCTGCAA TGGTCACCCC GGAACACTCC CCGGTGCATG TGGTTGATCT CATGAAAAAA
GGAGCAGGGG CAGTAATCGT TGTTGATGAT GGAGGAGCGG TCGGGATTAT TACCGAAAGT
GATCTTGCCT TTTATGTAGA TAACCCTGAA AATGCGGGGT CTGGTACCGC AGCAGGGATG
ATGAGGCCGA TAATCCCGTC TCTTCCTGAG ACAGCGAGAA CCAGAGAAGC CGTGGCGGTC
ATGTTAGAGA CTGCCTGTCA GAGTGTGATA ATCTCTGGCG GGAACGGCAT AAAAGGAATA
ATTACCAGAG ATGACATAAT ACGGGAAGTG GTTCAATGA
 
Protein sequence
MLVSDLMSTP VHAAKPGDTV SHARNLMLRH KISRVLVVDE GRARGIITKK DIGFRLRKND 
PDWRYRKMDS APLSQVMSTD LVSLSPDSSI RDALLLLVSH EISGAPVIDQ GMVLGILTRT
DILRSHLVAQ LDIPVHEIMH EPAMVTPEHS PVHVVDLMKK GAGAVIVVDD GGAVGIITES
DLAFYVDNPE NAGSGTAAGM MRPIIPSLPE TARTREAVAV MLETACQSVI ISGGNGIKGI
ITRDDIIREV VQ