| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2904 |
|---|
| Symbol | |
|---|
| ID | 3924854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3181784 |
|---|
| End bp | 3182563 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637898518 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_504315 |
|---|
| Protein GI | 88604137 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA CCATACTTGT ACGAGACGTG ATGGCAAAAC CGGTTACGGT AGCAAAGTCT
GCTCCGGTCA CCGATGCCCT GGATAAAATG CTTGATACCG GACTTGATCC CCTCGTGGTA
CTTCACCACG ATGAAGTGGT CGGGACAGTA TCCCGTCAGA AGATAGTTGA AAAACTTGGT
GCCAGACACA GCTCTGAAGT TGCACCAACC GCGATCCACG TCTCCAATAC CATTGACACC
GAATTTACCA TTGTATATGA GGACCAGGAG ATCGACGTCC TGATTCCGCT TCTTCAGAAC
CAGGCAAAAC TGGCTGTTGT GTACAATGAA GACAACAAGA TTGTCGGACA GGTGGCATAT
GGAGACTTAC TCGCTAAGAT GGTCCCAGAA GGAGACCTCT CCTCGGTCAC TGAGCCTCAC
CATGTAATTG AGGCCGGAGA ACGGATGGTT CATCTCCGCC GGAAGATGGT TGATGAGAAG
ATTGCCAGAT ACATTGTCAT GGCTGACAAC AAGATCGCAG GACTGGTCTC TGAGACCGAT
GTTGCTGTTG CTCTTACCAA ATTCCGTGAA GCAGTTGATG ACCGGCACCA GGAACATCAG
ATACGTAATA TTCTGGTCAG GGATATTATG AGTTCTCCGG TTATGAGTGT TGAAAAGAGT
GCAACGATCC CGGAAGTTGT GTCAAAGATG CTTTCAAAGA ACATAAGCAG CATCCCTGTC
ACAGATAATG GGAAAGTTAT CGGAATCGTT ACCCGGGAAT CCCTTATCCG GGCGTTATAG
|
|---|
| Protein sequence | MTNTILVRDV MAKPVTVAKS APVTDALDKM LDTGLDPLVV LHHDEVVGTV SRQKIVEKLG
ARHSSEVAPT AIHVSNTIDT EFTIVYEDQE IDVLIPLLQN QAKLAVVYNE DNKIVGQVAY
GDLLAKMVPE GDLSSVTEPH HVIEAGERMV HLRRKMVDEK IARYIVMADN KIAGLVSETD
VAVALTKFRE AVDDRHQEHQ IRNILVRDIM SSPVMSVEKS ATIPEVVSKM LSKNISSIPV
TDNGKVIGIV TRESLIRAL
|
|---|
| |