| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2901 |
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| Symbol | rps4p |
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| ID | 3924462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 3179386 |
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| End bp | 3179931 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637898514 |
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| Product | 30S ribosomal protein S4P |
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| Protein accession | YP_504312 |
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| Protein GI | 88604134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.104435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTATC CAGGTAAAAA TCACAAACAG TACCAGACAC CCAAGCGTCC GTTCGAACTC
TCCCGTATTG AGGAAGAGAC CCGCCTTGTT ATTGAGTATG GTCTCAGAAA CAAGCGGGAA
GTCTGGATTG CCAAGGGTGC ACTCCGGAAG TACCGCAAAG CAGCTCGTGA AATCATTGCT
CTGCAGTCTA CCGGTTCAGA ACAGGCACGT GTTGAACGGA AGAAGGATGA ACTGATCGGA
TCTCTGCAGC GTTCCGGAAT GCTTTCAGAG AATGCAGATA TTGATGATGT GCTTGCACTC
AAGGTGGAGC AGCAGCTTGA CCGGAGACTT CAGACTCAGG TCTACCGACG TGGATTTGCA
CGTTCACCAA AGCAGGCACG CCAGTTCATT ACTCATGGAC ATATTGCAAT AGGTGGACGC
CGTGTTACCA TTCCAGGATA CACGGTAAGT GCAAAGGAAC AGGAAGAGAT CTCATACGCC
GGGTCTTCAC CACTGGTCAG TGATATTCAC TCAGAACGCC AGCGGATTGC AAAGGTTGGG
AGATAA
|
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| Protein sequence | MGYPGKNHKQ YQTPKRPFEL SRIEEETRLV IEYGLRNKRE VWIAKGALRK YRKAAREIIA
LQSTGSEQAR VERKKDELIG SLQRSGMLSE NADIDDVLAL KVEQQLDRRL QTQVYRRGFA
RSPKQARQFI THGHIAIGGR RVTIPGYTVS AKEQEEISYA GSSPLVSDIH SERQRIAKVG
R
|
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