| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2854 |
|---|
| Symbol | |
|---|
| ID | 3923682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3136757 |
|---|
| End bp | 3137923 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898466 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_504265 |
|---|
| Protein GI | 88604087 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.233123 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC AGGCAGTCAT CCTGGCAGCC GGGGAAGGGG TGCGACTCCG CCCGCTCACG
CAGAACAAAC CAAAAGCTCT TATCCCGGTC GCCAATAAGC CAATTATTGA GCATACAATC
CTGTCACTTC TGGAAGCAGG GATACGGGAT ATTATCGTCG TAGTCGGATA TCGGAAAGAG
CAGGTAATGC GGCATCTGGC ACATCTGAGT GTGCCGATCA TGATCGTACG GCAGACCGAG
CAACTTGGCA CAGCCCATGC ACTCCTCTGT GCACGTGACC GGATCGCTGG AGACGTTCTT
GTTCTCCCCG GAGACAATTA CATCGATCCT GACTCCATCA GGGATATCGC CAGGATAAAA
AACTCCCTGT TATACACTAC ACACCGTCAG CCATCAAACT TCGGGGTTGT CACCATTGAG
GATGATGCGG TTTCCAGTAT CACAGAAAAA CCGGTTCTTG CAAGTAGGAT GACGGTCAGT
TGCGGAGTAT ACCATCTGGG ATCTGAGCTC CTCGCCAGAA TAACCACTCA AAGTCTCAGT
GAGGCAATCG ATGAAGAAAT CAGACGGGAT ACCAGGATTG CTGCAGTAAA AGCTCATTCC
TGGCAGGATG CCATCTACCC CTGGGACCTC CTTGTCATGA ATGATCGTCT CCTACCTTTT
ATATATCAGG AAAAATCGGG AATTATCAGC TCATCAGTCA ACATGCAGGG AAAGGTCTCC
ATTGGATCCG GAACCAAAAT TGGTCCTGGA ACCGTGATAA CCGGACCGGT AATCATCGGA
GAGGACTGCA CCATCGGACC GCATGTTGTC ATTGAACCGG GGACCAGTAT CGGATCCCGG
GTGAAGATCG AACCATTCAC TGTCATTCGG AGATCTATCC TCATGGATGA TGTGGTTATC
GCATCTCATA GCAGCATTTC AGGATCGGTC ATCGGAGAGG GATGCACTCT TGGAGAGTAT
ACATCTGCCA TATATGCCAG GGGGTTTATT CCATCAGAAG ACTCTGCGAT CCGTGCTGGA
TGCGGAGTCA TCATGGGGAA TGGTGTCTTT TGCAAACCCT CAGTCATGTT TGAGAATACT
ATCGTCGGCA ATGAGGTGAC CATTGAGGGA CGAACAGATC TCAGATTCTC CTGTACCCGG
ATTCCGGATA AAACCCGGGT GATATAG
|
|---|
| Protein sequence | MSLQAVILAA GEGVRLRPLT QNKPKALIPV ANKPIIEHTI LSLLEAGIRD IIVVVGYRKE
QVMRHLAHLS VPIMIVRQTE QLGTAHALLC ARDRIAGDVL VLPGDNYIDP DSIRDIARIK
NSLLYTTHRQ PSNFGVVTIE DDAVSSITEK PVLASRMTVS CGVYHLGSEL LARITTQSLS
EAIDEEIRRD TRIAAVKAHS WQDAIYPWDL LVMNDRLLPF IYQEKSGIIS SSVNMQGKVS
IGSGTKIGPG TVITGPVIIG EDCTIGPHVV IEPGTSIGSR VKIEPFTVIR RSILMDDVVI
ASHSSISGSV IGEGCTLGEY TSAIYARGFI PSEDSAIRAG CGVIMGNGVF CKPSVMFENT
IVGNEVTIEG RTDLRFSCTR IPDKTRVI
|
|---|
| |