| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2807 |
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| Symbol | |
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| ID | 3923020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 3079376 |
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| End bp | 3081106 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637898418 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_504220 |
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| Protein GI | 88604042 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.233123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CACGTCAGGT TCATGGTTTC ATCATACTGG TGGTATTGCT TTTTACCGTG
CCAGCTCTTG CCACACAGTC TGATGACCTG ATATCAGACG GGAATGTCTT ATACAGCCAG
GGAATGTACC AGGAAGCTAT CTCCTATTTT GAGCGTGCTA TTGAACAGGA TCCTTCGAAT
GCAGCGGCAT GGTACAATAA AGGGGTTTCA CTTTATAAAC TAGGTCAGGT GGATGAAGCA
ATCGCCTCAT ATGAGGTCGC CATCGGGCTT GATCCCCGGA ACTCTGATTA CTGGTACAAT
AAGGGAAATG CCCTCTTAAG TAAGAACCTG CTCAATGAGG CATATGCGGC ATATGATGTG
GCAATTCAGC TTGACCCCTA TGATGTACAG GCCTGGATGG CAAAGGGAAA TGTTCTGTCT
GACCAGAAGC AGTACGAAGA TGCCATCAGG GCATATGATG CTGCTATCCA GATAGACCCG
GATAATGAGG AGACCTGGTT TGCAAAGGGG AATGCTCATT ACAACCAGGA AAATTTTAAA
GAAGCGGTGT CCGCCTATGA GATCGCTTTA CAAAAGGACA GTAAGGACAG TAAGGCCTGG
TACAACAAGG GAAATGCCCA GTATAATCTT GGAAACCTTG AGGATGCCCT GAAAAGTTAT
GAGATGGCCC TTGCCTATAA CCCGAAAGAT GCCATTGCAT ATACGAACAA AGGAATGGCT
CTTGCAGATC TTGAGCGGTA CGACGATGCA ATTGATGCCT ATGAGGCTGC TCTCAGCCTT
GACGCAACCG ACCTGAAAGC CTGGACCTCT CTTGGACAGG TGTATACGAA ACTGCGAGAG
TATGATAATG CTGTCCGGGC ATTTCAGATG GCTCTAAAGC TCAACAAGAC TGACTCATCG
GTCTGGAAGA ATATCGGCGA TGTCCTCATG CTGGAAAAGC GGTACGATGA GGCACTTGCT
GCATATGAAC AGGCCATCGC ATTAAACCGG ATGGATTCAT CAGCCTGGAT TGGGAAGGGA
ACTGCTCTGA ATAACCTTGC CAGATACAAA GAAGCTCTGG GCGTATTCGA GATAGCCTGC
TCCATGTCTC CCCTGTTTGC TTCAGGATGG GTAGGAAAAG GGAACAGTCT TTCCGGACTT
GGGCAGATAC AGGAGGCTGA TGGTGCGTAT GAAGCAGCGC TTCAGCTTGA CCCGAGGAAC
AGTCAGGCAC TTGCCGGAAA GAGTAAGAAT CTGGTGACAA CCGGCGATCC GGAGACTGCA
CTCCAATCCC TGCAGCTAGC CATTGCCGCT GATCCGACAA ATATGGCCCT GCTTGGCCGG
CTTGCCGAGA TATATGAAAA AATGGGGCGG TATCAGGATG CTCTTGATGT CTGGAATTCA
GTCTCCCTGA ATGAATCTGA TCCTAACCTT GTCAGAAAAG GAAAAGCGAT GACTCTGGTC
CGGGCAGGCA GGGAGGCTGA AGCGCTGGCT TTATATCGGG ACGTTCTTGG ATCCGATCAG
CAGTCAGGGT TTGTGTATGA GCAGTATGGG GATGTGCTGG CACTTGCCGG AGATACCCCT
GGAGCGGAGC ATGCCTACCG AAAAGCGATG GAGATACAGC CAAACCTGAC CGGGATCCTT
CTGAAGATTA ATGCACTTGA ATCCACTCAT AAAGAGACTC CGCTCACAAT CTTCCCAATA
CTACTCGGAC TTATCACCGG ATGTCTGCTC CTGGTCAGAA GAGAGCGGTG A
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| Protein sequence | MTIPRQVHGF IILVVLLFTV PALATQSDDL ISDGNVLYSQ GMYQEAISYF ERAIEQDPSN
AAAWYNKGVS LYKLGQVDEA IASYEVAIGL DPRNSDYWYN KGNALLSKNL LNEAYAAYDV
AIQLDPYDVQ AWMAKGNVLS DQKQYEDAIR AYDAAIQIDP DNEETWFAKG NAHYNQENFK
EAVSAYEIAL QKDSKDSKAW YNKGNAQYNL GNLEDALKSY EMALAYNPKD AIAYTNKGMA
LADLERYDDA IDAYEAALSL DATDLKAWTS LGQVYTKLRE YDNAVRAFQM ALKLNKTDSS
VWKNIGDVLM LEKRYDEALA AYEQAIALNR MDSSAWIGKG TALNNLARYK EALGVFEIAC
SMSPLFASGW VGKGNSLSGL GQIQEADGAY EAALQLDPRN SQALAGKSKN LVTTGDPETA
LQSLQLAIAA DPTNMALLGR LAEIYEKMGR YQDALDVWNS VSLNESDPNL VRKGKAMTLV
RAGREAEALA LYRDVLGSDQ QSGFVYEQYG DVLALAGDTP GAEHAYRKAM EIQPNLTGIL
LKINALESTH KETPLTIFPI LLGLITGCLL LVRRER
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