| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2774 |
|---|
| Symbol | |
|---|
| ID | 3922643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3044139 |
|---|
| End bp | 3044816 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637898385 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_504188 |
|---|
| Protein GI | 88604010 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCGA TTTTCCATTC CAAAACCAGG AAAAGACCTC CGCGGTGGGC ATTGGTACTT
CTGGCTCTCC TGTGCATCAT GGCAGTATGC TGCTCTCCTG CTCTTGGTGC TCGAGATGTC
AGAGTACCTC TGACTGAGCT CAGGCCCTCC CTGTTCACCG ATGAGCAGGG AAACCCGGCC
GGGTTTTTTG TCGACCTTAT CGAGGATCTG GCTAAAAAAG AAGGTTGGAG TGTCATCTGG
GTAAGTGGTA CACTCTCTGA GAGCTGGGAT CGCCTGTCAC GGGGTGATGT CGATCTCATG
CCTGCGGTGA CGGTCACGCC AGAACGGCTC ATACTCTATG ATTTCACAAA TGAATCGGTT
CTCTCGATCT GGTCACAGGT CTATGCACGC CCTGATTCGG GCATCAATAC CATCCTTGAT
CTGGAAGGTA AACGAGTCGC AATGGTCAGG GGAGCATCCA GTGGGGTGGG ACTTCGGGAC
TATGCAGAAA AATTCGGAGT AACTGCCATA TATCTGGAGA AGGACACAGC GACCGATATT
TTTACCGCTG TTTCAGAAGG AGAAGCAGAT GCCCTTGTGA TGTTTAACTC TGCAGGTCAG
GAGGAGGTGA AGGAATACGG GCTTGCCACA ACCCCGGTTA TGTTTAACCC GGCACAGTTT
GGGTTTGCGG CATTATAG
|
|---|
| Protein sequence | MIPIFHSKTR KRPPRWALVL LALLCIMAVC CSPALGARDV RVPLTELRPS LFTDEQGNPA
GFFVDLIEDL AKKEGWSVIW VSGTLSESWD RLSRGDVDLM PAVTVTPERL ILYDFTNESV
LSIWSQVYAR PDSGINTILD LEGKRVAMVR GASSGVGLRD YAEKFGVTAI YLEKDTATDI
FTAVSEGEAD ALVMFNSAGQ EEVKEYGLAT TPVMFNPAQF GFAAL
|
|---|
| |