Gene Mhun_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2739 
Symbol 
ID3922212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3008313 
End bp3008990 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content50% 
IMG OID637898350 
ProductDNA repair protein RadC 
Protein accessionYP_504153 
Protein GI88603975 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCA AGCGGATAAC TGATATTGAT CCCCTTGACC GCCCCAGGGA GAAGATTGAA 
AAGAAAGGGG CATCTGCCCT GAAAGATAGT GAACTAATCG CAGCAATCCT GGGAAAAGGA
ACGAAAAATA ATGATATCCT CACCATCTCC AGCCAGGTTG CGGATCTTCT AAAGAAAGAC
AACCTTCCGT CCTATGATAC ACTTCTTAGG ATAAATGGCA TTGGACCGAC AAAAGCAGCG
GTGCTCATGG CCTGTTTCGA ACTTGCCAAC CGGTACGGGA CCCCTGCAGA AAAGGAACGG
ATCCGGATAA CCGAGCCGGA TCATATCCTG AAGATATCTG AGGTGACTGA CCTTTCCGGA
AAATCACAGG AACATTTCCT CGTTACCACC CTGAATGGCG CTTCAGAAGT TATTTGCACC
CGTACCATTA CAATGGGACT ATTAAATCAC AGCCTTGTCC ATCCACGGGA AGTCTTTGCC
GATGCGATAA CCGACAGGGC GGCTGCGATC ATCTGCATCC ACAACCATCC CTCCGGAAAC
CCTGAACCAA GTTCTGAAGA TATCACGGTG ACCAGGCAAC TCTCAGAGGC CGGGAAGATT
CTTGGCATCA GCCTTCTTGA TCACCTGATC TATACCAAAG GGAAGGTCAC CTCCCTTCGC
AGTCTTGGAT ACCTCTGA
 
Protein sequence
MPAKRITDID PLDRPREKIE KKGASALKDS ELIAAILGKG TKNNDILTIS SQVADLLKKD 
NLPSYDTLLR INGIGPTKAA VLMACFELAN RYGTPAEKER IRITEPDHIL KISEVTDLSG
KSQEHFLVTT LNGASEVICT RTITMGLLNH SLVHPREVFA DAITDRAAAI ICIHNHPSGN
PEPSSEDITV TRQLSEAGKI LGISLLDHLI YTKGKVTSLR SLGYL