| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2596 |
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| Symbol | |
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| ID | 3923213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 2867575 |
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| End bp | 2869284 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637898207 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_504012 |
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| Protein GI | 88603834 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3322] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAGT CTGTATTCGG GCACCTTATT CTGGCAACTC TTATATTCTC TACTCTGCTT
ATCTCCGGAG TATTATTGGT ATCGCATTTC ACGGTCATGC AGGGAATTAC TGATGCAGAA
CGTGCAACTG CTCCGGAAGT CGCAGAAAAG GTCGTTCAAA TCCTGAAGAT GGAAGAGAAG
AGCCTGTCAT TATTTACCCA TGACTGGGGG GTATGGGATG ATACCTACCA GTTTGTCCAG
GATGGGAACT ATCAGTATAT CCAGTCAAAT CTTCAGGATG GAACTTTTTC AGCATCACAA
CTTGATCTTG CAATTTATTT AAATAAAACC GGGGGAGTTG TCTTCCAGAA GGGGTATGAT
TCTCAAAAGC AATCGGCAGT TCCCATACCT GATGATGTAT TTGATTTGAT ATCGCGATAT
CAGCTTCTCA CCGATCCTGA TCTGGTTGAT CCGATTACTG GTATCATCCC TCTGAAATCC
GGTCCGGTCC TTATCGCGGT TCAAGGGATC TACCGGAGTG ATGAGACCGG CCCGCAGGAA
GGATATCTCA TTTTTGGAAG ATATCTTGAT GAAGACCGGA TTATGGAGAT ATCTGATAAT
TCGGTATTTC CATTTCAGAT TGTTGGAACT TATGCAGATC GGGAACAGTA TGTCAAAGCT
TCTCTCCCGT ATGCAGAACT GGATCCATCA GGTCAGAAGT TCATCATATA CAGCGTTATT
TCAGACATTC GGGACAATCC TGCATACCTT GTGAAAACTG AAATACCATT CAGAACTCCC
TATACATCCT CATTGATACT ATATTTGATC CTCACATCCG CCATTCTGTG CGGCCTTTTT
TTCGCCGGCC TCATTCTGTA TTACCGCAGA TATCTGCTTT TTCATCTCCA AGGAATTGCG
AATATCCTGG ATTCATCACA GAGTCCTGAT TGTCAACCCT GCATTCTCCC AAATGCCCCG
GTAGAGCTGA CTCCGCTGGT AAAGGCAGTT GATAACACCG CCTCCTCACT TCGGAAACAT
CAGGATGAAC TTGCCCGGAC CCAGGAAGAA CTGGCTGAAG CAGAAGAGCG AATAAGAATT
CTGTTTGAAC AAGCGCAGGA TGCCATCTGT GTATTAGACG GGACAAAAAT CGTAGATTGC
AACCAGGCCT TTTCTGCTAT TTTTCAGAAA GAACGTGGAA CATTCATCGG TCAGGATTTG
TGTCAACTTT CCGTGCATAT AGACAACCGG TATTCATCAT CGCTTCATGG ATTCTGTCAG
CGGATTTTGG ATCACCCTGC AGGATCGGGT ACCAGGTTTG AATGGTCATT TCCGGTTTCT
TCAGGGCAGA TATCTGATGC CAGCTCAGAT CAGGTCGTTT TCGATATTAT CATCCGGGAT
ATCAGATATC ATGAGAATAG TCTAGTTTTT ATTATTGCCC GTGATATCAC CCGCCAGGTA
GAGTTTCAGC AGAACCAGGA GCGGCTTTAC CAACAACTTG AAGAGAACCT GGTTCATATG
GGCGCCTTAA ATGATCAGAT CAGAAATCCA TTGACCATCA TCTCCACGTT GGTTGATGAA
AATGAGTCTC CTGAAAAGGA TCGTATCCTC TATGAGGTTG ATAGGATTGA TAAGCTCATT
GATCGCCTTG ATGACGGGTT TATTTCGTCA GAAAAGGTAT GGCAATACCT GCATAAGAAG
CATGAAAAAT TTGAGGATAC CGTTTTCTGA
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| Protein sequence | MRQSVFGHLI LATLIFSTLL ISGVLLVSHF TVMQGITDAE RATAPEVAEK VVQILKMEEK
SLSLFTHDWG VWDDTYQFVQ DGNYQYIQSN LQDGTFSASQ LDLAIYLNKT GGVVFQKGYD
SQKQSAVPIP DDVFDLISRY QLLTDPDLVD PITGIIPLKS GPVLIAVQGI YRSDETGPQE
GYLIFGRYLD EDRIMEISDN SVFPFQIVGT YADREQYVKA SLPYAELDPS GQKFIIYSVI
SDIRDNPAYL VKTEIPFRTP YTSSLILYLI LTSAILCGLF FAGLILYYRR YLLFHLQGIA
NILDSSQSPD CQPCILPNAP VELTPLVKAV DNTASSLRKH QDELARTQEE LAEAEERIRI
LFEQAQDAIC VLDGTKIVDC NQAFSAIFQK ERGTFIGQDL CQLSVHIDNR YSSSLHGFCQ
RILDHPAGSG TRFEWSFPVS SGQISDASSD QVVFDIIIRD IRYHENSLVF IIARDITRQV
EFQQNQERLY QQLEENLVHM GALNDQIRNP LTIISTLVDE NESPEKDRIL YEVDRIDKLI
DRLDDGFISS EKVWQYLHKK HEKFEDTVF
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