Gene Mhun_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2548 
Symbol 
ID3922492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2827193 
End bp2828113 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content49% 
IMG OID637898160 
ProductXRE family transcriptional regulator 
Protein accessionYP_503966 
Protein GI88603788 
COG category[K] Transcription 
COG ID[COG1395] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.267127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGG ATCGTCTGCT CCGTAATGTC ATCAGTGTGA TGATCATGGC AGGATATGAA 
GTATCCGAAG TTTTCGCAAT GAGACCGAAG AGTTTTGACA TCATTGCAGG AAATGGTGAA
CGGATAGTAG TCCTGAAAGT CATCTCACAT ATCGATAGCA TTAGCGAAGA GAATGCACGG
GATCTTGACA GAATCGCACG TAACCTTGAC GGTACTCCCC TTATCGTCGG TGAACGGGCC
CGTGATGCTG AACTTGAACG TGGCGCAGTA TATGTCAGGT ACGGAATATT CGCGATAAAT
TACCCGACCT TGCATGATTA TTTTGTAGAA GATTCCCCCC CGCTCATTTA TGCATCACCC
GGTGGTCTGT ATGTGAATAT CAGCGGGGAA CGGCTGCGTG AACTTCGTGA GACCAGAAGC
CTCTCTCTCG GAGACCTGGG GCAGATTCTG GGTGTTTCCA GACGGACGGT GGCAAAATAT
GAGGCAGGCA TGGGAACAAC GATTGAGATA GCGCTGCGTA TCGAAGAGAC TTTTGACTCA
GGAGTAATCG AGCCGATCGA TCTCATTCAG TCAAAATCAC AGTTCACAAA ACCTGAAATG
CCAGAGGTTC CGGAGGAGAT ACCGATTCAG GCTGCAATAG AAGAGATGGG TATGCATGTC
CAGCCCATGT ATCATGCACC ATTTCAGGCC CTTGTCAGGT ATGATTCACA TACCATACTC
ACCGGATATG GATCGGCACA AAAAGTCGCA CGACGTGCCG GGATCATTGG CAACATTTCT
CAGGTGACGC GGACACATGC CATGTGTGTG ATGACCGATG ATCAGCGACA GCGCAGAATA
GGCCGTACCC TGATGATTGG TGAGGATTCT CTTCTTTCTC TTGATGAGCC GGATGATCTC
ATCAATCTGA TCCTAAACTG A
 
Protein sequence
MSQDRLLRNV ISVMIMAGYE VSEVFAMRPK SFDIIAGNGE RIVVLKVISH IDSISEENAR 
DLDRIARNLD GTPLIVGERA RDAELERGAV YVRYGIFAIN YPTLHDYFVE DSPPLIYASP
GGLYVNISGE RLRELRETRS LSLGDLGQIL GVSRRTVAKY EAGMGTTIEI ALRIEETFDS
GVIEPIDLIQ SKSQFTKPEM PEVPEEIPIQ AAIEEMGMHV QPMYHAPFQA LVRYDSHTIL
TGYGSAQKVA RRAGIIGNIS QVTRTHAMCV MTDDQRQRRI GRTLMIGEDS LLSLDEPDDL
INLILN