| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2418 |
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| Symbol | |
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| ID | 3922405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 2667688 |
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| End bp | 2668686 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637898028 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_503839 |
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| Protein GI | 88603661 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT TTCATCAGGG GGATTACCAA CGGGCCACCA TGAAATTTCG ACAACTCATC
GATTATGACA AAACAGACGC AAGAGCCTGG AATGGTCTGG GAATGTGTCA GGTCCGTCTG
CATGACTATC ACGAGGCACA TGCAAATTTT CTGAATGCAA TCCGGTTTGA CCCTGACAAT
CAGATCTATC TGAAAAACCT CCATGAACTG ATGGTTACCT ATCTGAATGA CGATGACCGG
AAAACAGAGT CCCCTGTCCC GGTAACTGGC AGAATTAATC GAAATGATAT TCTCCGTTTT
ATAAGGAATG CTGCCTGCCT GTGTATCGGT TGCATACTCC TCATCATGTA TGCTTCACTC
CTCCTTCTGG ATATGGCAGT TATCTACCCC GCCCTTCATA TAATCGGGGT ATGTGGACTC
ATCTTCATCC TTTTCTATCT TGATACATCA CTCCTGAAGT ATCTCACCCG GATGGGCGTG
AAAACCACAC ATCTCTTCGC AATCTTTATT GTATGTGCAA GTATGGTGTG CCTCATGATA
CTGCTCGTCA CCTTTCCCGG ACCTGGACCA GCCACTGCAC CTGCAAACCT TCAAAAAATG
CAACCATCAC CTCTCATAAC TCCGTACATG CCCGCACCGG CTGTCCAGAC TTCTCATCAG
ATACCTGCTG CAATGCCAGA TCCTGGAAAT GAACGTAACC CCTCTGATTC ATCCAGAATA
CAATGCACAA AACCCGATGC CTCCTTTGAA TATGAAGTCA TCAGCATTAA TCCGTATCAG
GTCCGATTCT ACCTGACTGA TAATGGAACT CCCTCTGTAC CGGTCGAGAT GGTATGGGAC
TTTGGATCCC GGACGAATGG AACTGGAACA GCGCAAAATT TAGGTCCACT TGGGCTTTCT
GCTGCCTATG AAGTCAATTT AACCATCCGG AATGCATGTG GAGAAACCAA CTCTGCCATC
AGAACAATAG AGCCAGTTAA TAAGAGTATT CGTTTGTAG
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| Protein sequence | MKLFHQGDYQ RATMKFRQLI DYDKTDARAW NGLGMCQVRL HDYHEAHANF LNAIRFDPDN
QIYLKNLHEL MVTYLNDDDR KTESPVPVTG RINRNDILRF IRNAACLCIG CILLIMYASL
LLLDMAVIYP ALHIIGVCGL IFILFYLDTS LLKYLTRMGV KTTHLFAIFI VCASMVCLMI
LLVTFPGPGP ATAPANLQKM QPSPLITPYM PAPAVQTSHQ IPAAMPDPGN ERNPSDSSRI
QCTKPDASFE YEVISINPYQ VRFYLTDNGT PSVPVEMVWD FGSRTNGTGT AQNLGPLGLS
AAYEVNLTIR NACGETNSAI RTIEPVNKSI RL
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