| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1795 |
|---|
| Symbol | |
|---|
| ID | 3924444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2028936 |
|---|
| End bp | 2029793 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637897415 |
|---|
| Product | thymidylate synthase-like |
|---|
| Protein accession | YP_503235 |
|---|
| Protein GI | 88603057 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03283] thymidylate synthase, methanogen type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTAA TCAGGAAGCG GAGTATCGGA CAGGCCCACG AAGAGGTAAT CAGGGAGATT
GCCAGGCGAT GTGAGGGGCA GGTCAGGGTA ACTGAAGATG GTGAATATAC CTGGGATCCG
GAAGAGCCGA TCTGCATACA CGTGGAAGAG CCTTTTGCAG AGCCGATGCG TTCAGGAGCA
TCACTTTTTG GAGAGAAATT CTCTGAACAG TACCAGGCTT CCCTCTATAC GATTACACCG
CGCCGTGACG ACGGGACGGA TGCCGTGTAT ACCTATGGCA ACCGGCTTCG TGATTATCCG
AAAGCTGAGG TGGGAATAGT CAGCAAACAC GGAGGGGCGG TCAAAAAAGC CATCGATGCC
CTCTTTAGAA AGCTGGGATA TGTTCCAGCT GATGCATGCG GGGAGCTTAT CTGGAAGGGT
GACGGACGAT ATGGGGGGAT TGACCAGATA CAGGAGAGCA TCATTAACCG GCTGATTCAA
AACCCTGAAA GCCGTCGTGC AATCTCAATT ACCTGGTTCC CGGTTCAGGA TATCACCGCT
GATGAGCCCC CCTGCCTGCA GCTGGTGCAG TGCGTCATCG ATAAGAATAA TCATCTCAAC
CTCATCTGTG TCTTCAGAAG TAATGACATG TTATCAGCCT GGGGTCAGAA CGCATACGGC
CTTGCCCATC TCCAGAAATT TATTTGTGAA CAGATTAACC TGAAACGAAA AAACGCCGAG
GAAAAAGTCT CACAGGGGTG GCTTGAAACA ATCAGTATCT CTGCACATAT GTATTTTCAC
CGGGATCAGC TTGAACTCAA CCTGTTTTTG GAGAAGATAA AAACCGGAGA ACTCTTTCAG
TCTTTCCAGC GTAGATGA
|
|---|
| Protein sequence | MILIRKRSIG QAHEEVIREI ARRCEGQVRV TEDGEYTWDP EEPICIHVEE PFAEPMRSGA
SLFGEKFSEQ YQASLYTITP RRDDGTDAVY TYGNRLRDYP KAEVGIVSKH GGAVKKAIDA
LFRKLGYVPA DACGELIWKG DGRYGGIDQI QESIINRLIQ NPESRRAISI TWFPVQDITA
DEPPCLQLVQ CVIDKNNHLN LICVFRSNDM LSAWGQNAYG LAHLQKFICE QINLKRKNAE
EKVSQGWLET ISISAHMYFH RDQLELNLFL EKIKTGELFQ SFQRR
|
|---|
| |