| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1421 |
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| Symbol | |
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| ID | 3924084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1636123 |
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| End bp | 1637889 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637897053 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_502875 |
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| Protein GI | 88602697 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0454368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.405903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA TGAATGCTGC ATTGATGAAA ACTCACGATG ATAATCAAAA TAAAACCGAG
GAGGCGATCA TACGTGAAAT TCAGCAAATA CTGGCTAAAA ATCGCCAGGG CATGACAATA
TCTGATATTT CCAGATCTCT CGGGATTAAC CGGACATTAA TCCTGAATAT CCTCAATCTC
ATGACCGGCA GAGGAGAGAT CTCCATGAGA TCCTTTGGAA GGGCAAAAGT GTACACTCTT
TCTTCGCGAA TTCCTGTTGC GCGACTCTTA AGCCTGTCCT CTGATCTGTT TCTGATTGTC
GATGAAGACC TATTTGTTGA AGATGTAAAT GATCCATGTG CTTCATTCTT CAACGTTCAG
CCAGATGAGG TGAGGGGGTC GAATATCCGG TATACCGGGA TCCCTGAATT GTTTTCATAT
GATATAATCA GGGCACTGGA AGATGCAGTA GCGGGAAATA AACGAATCTT TGAAGATTAT
GTGGGTATGG AAGGAAAAGA GTGCTTCTTC CGTGTTTCCT GTATCCCCAT TCAGGAGAAT
GATTTCTCAA CAAAAGTAGC CCTGGTTCTG CATGACCTGA CATTACATAA AAAATACGAG
GAAGAGCTGG AAGAGCGTCT GAATATACAA ACCCGTGAGC TTTCTTCAAG TCTTCACCGG
TATGAAACTC TTGCAGAAGT CGCTCCTGTT GGAATTTTTG AGGCAGATGC AAAAGGCAAA
GTCATCTATG TAAATCAAAA ATGGTGTGAG ATAACCGGGT ATGAGCCAGA CGAAGTAAAA
GGATCGAAAT GGGTGAAAGT GATTCACCAT ACTGAACGGG ACTGGATCAA AGGACTCTGG
TATGAACATG TCGCCGAGGG AATACCCTGG AATCATGCAT ACCGGTACCA GAAAAAGAGT
GGAGAAGAGG TTCATGTTCT GGGAATGGCA GTTCCATTAA GGAATGATGA TGGTGAGGTA
ACCGGATACC TGGGAACTGT TGTCGATATT ACTGATCGTG TTACTGCTGA GCAGATCATT
CATGATTTAA ATGTATATCT TACGACAATC CTTGAAGATG CAAACGACGG AATTCTTACC
CTCGATAATG ACAGACGGTT TGTAAGTTGT AATGCTGCAG GATGCAGGAT TCTGGGGTAT
GAAAAGAGTA TCCTCACCGG TCAGAGTATC AGAATGATCT ACCGTTCAGA TGAAGAGTTT
GAAAAGATTG GGGAAAAAAT TTACCGAGAA ATAACTATGA CCGGACATTA TCGAGGTGAA
ATTCCGATCA TCAGGGGTGA CGGTGAGGAA CGAATCATAG ACGTCTCCAT CAGTGATATG
AAAGAGCATG GGACCATCAC CGGAATTATT GTGCTGTTTC GTGATGTAAC TGAGAGTTCG
CGGGAGAAAA AGAAGGTGAT TCTTCAGGAA AACCAGTTGA AAAAAATACT TGACGGACTT
ATCGATGCTG TTTGCGTAGT TGACCGGAAT GGCACCATTC TGTATGCAAA TTCCTGTGCA
TGTACATATA TGACCGGTTC AGAATCACTG GAGAGGGAGA ATATGACGTT GTTTGATCTT
TTCCCTGAAG AAGAGGTTAT TTCGCTCCTT TCATACTATC AAAGAATTAT TGATTCTAAA
AAACCTGACT CGAAACGGAT GAAAGTTACT CTACGGGGGC AGGAATATTG CTTTTTCAAT
CGTTCTGTAC CGATACAATT CGGAGAGAAT AACATTGATG CAGTTCTCTC TCTGTCACTT
GAAACCGGAG TATTTGAGCA TGTTTGA
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| Protein sequence | MKTMNAALMK THDDNQNKTE EAIIREIQQI LAKNRQGMTI SDISRSLGIN RTLILNILNL
MTGRGEISMR SFGRAKVYTL SSRIPVARLL SLSSDLFLIV DEDLFVEDVN DPCASFFNVQ
PDEVRGSNIR YTGIPELFSY DIIRALEDAV AGNKRIFEDY VGMEGKECFF RVSCIPIQEN
DFSTKVALVL HDLTLHKKYE EELEERLNIQ TRELSSSLHR YETLAEVAPV GIFEADAKGK
VIYVNQKWCE ITGYEPDEVK GSKWVKVIHH TERDWIKGLW YEHVAEGIPW NHAYRYQKKS
GEEVHVLGMA VPLRNDDGEV TGYLGTVVDI TDRVTAEQII HDLNVYLTTI LEDANDGILT
LDNDRRFVSC NAAGCRILGY EKSILTGQSI RMIYRSDEEF EKIGEKIYRE ITMTGHYRGE
IPIIRGDGEE RIIDVSISDM KEHGTITGII VLFRDVTESS REKKKVILQE NQLKKILDGL
IDAVCVVDRN GTILYANSCA CTYMTGSESL ERENMTLFDL FPEEEVISLL SYYQRIIDSK
KPDSKRMKVT LRGQEYCFFN RSVPIQFGEN NIDAVLSLSL ETGVFEHV
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