Gene Mhun_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1103 
Symbol 
ID3922136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1246467 
End bp1247789 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content51% 
IMG OID637896742 
ProductDNA primase 
Protein accessionYP_502571 
Protein GI88602393 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.245255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATGAAC AGGACACAAC GAAGTATCGA ATTCACCTGG TTGTCCAGGC TGACGGGGTG 
GTCGACCGAT CTGATGTAGT CGGGGCCATT TTTGGTCAGA TTGAAGGACT CCTCGGGTCA
GAACTTGAAC TTCGTGAGCT CCAGAGACAG GGCAAACTTG GCCGGATTGA TGTCAAGATC
CAGAGCAAAC TGGGAAAATC ATATGGTGAG ATAACCATCC CGACCTCGGT AGATCGGGCA
GAGACGGCAA TACTTGCCGC TTCCATGGAG ACTATCAACC GCGTCGGTCC CTGTGTCTCA
GAAATCCATG TTCAATCGAT TGAAGATGTC AGGATTACCA AACGGACCCA GATCATCGAA
CGGGCAAAAG CTCTCCTCCT TGAGTTTGAA GAACCAGGGA TTGATCCTGA TTCACTCATA
GATGCTGTAC GTGAAAGCCA GCGGATCGAG AAGATAGCAA CCATCGGAGT CGATAACGTC
CCTGCCGGAC CAAACGTCCT CGCATCTGAC GCCATCATCG TGGTAGAAGG GAGGGCAGAT
GTCATCAACC TCCTCCGGGC CGGAATTAAA AACGCTGTGG CTGTTGAAGG GACCAGTATT
CCAAAGACCA TCATCGACCT GTGCCGGAAA AAGACCACAA CCGCTTTCTT TGACGGGGAC
CGGGGAGGGG ATCTCATATT GCGTGAACTT CTTGAAGTCA CCGATGTGGA TTTTGTCGCG
TATCCTACAC GGGGCGAGTC GGTTGAAGAC CTGAGTCGTA AGGAGATAAT TAAAGCGCTT
CGAAACAAGG TGCCGGTTGA GTATGTCCTG GAAGACCGGG TCGCAGAGTA CCTGGCATCA
CAAAAATCTG AACAACAGAC TTCATCAATT CGTGAGCCTG AACCAGAGAG GGGAAGTGAA
CCGGCACGAT ATCAACAACC AGCCCCTGCC AGTGATGCAG TAATCTCCTG TGAATGCACG
GAAGAGATAC CGGATGCCGT CTCTGAAGAA GAGAGCGTCA CTGAGTATCA GGCGTATCTC
CCGGATGAGG AGGAAGATAA CCGGCCAAGA ACCGTGTTTA CCCATATCAG GGAGGTAAAA
AACCGTGGAA CTGCACGGTT TATCGGAGTT GGCGGTGAGA TGAAGAATGA ACTCCCTGCC
GGAGAAGTTG AGGAGAAACT CGGGGCATTG GAACAGGGCC TTGAGGGGAT TGTCATTGAT
CAGGAGATCA ACCAGCAGCT TCTTGACCAG TTCTCCATGC ATGGTATCAG GTATCTTGCC
GCACCCTCAT TTACCGGCAT AGTGCGGCTT CCGGCTACAA TACGCCTCAT TCCATTCAGA
TAG
 
Protein sequence
MYEQDTTKYR IHLVVQADGV VDRSDVVGAI FGQIEGLLGS ELELRELQRQ GKLGRIDVKI 
QSKLGKSYGE ITIPTSVDRA ETAILAASME TINRVGPCVS EIHVQSIEDV RITKRTQIIE
RAKALLLEFE EPGIDPDSLI DAVRESQRIE KIATIGVDNV PAGPNVLASD AIIVVEGRAD
VINLLRAGIK NAVAVEGTSI PKTIIDLCRK KTTTAFFDGD RGGDLILREL LEVTDVDFVA
YPTRGESVED LSRKEIIKAL RNKVPVEYVL EDRVAEYLAS QKSEQQTSSI REPEPERGSE
PARYQQPAPA SDAVISCECT EEIPDAVSEE ESVTEYQAYL PDEEEDNRPR TVFTHIREVK
NRGTARFIGV GGEMKNELPA GEVEEKLGAL EQGLEGIVID QEINQQLLDQ FSMHGIRYLA
APSFTGIVRL PATIRLIPFR