| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1011 |
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| Symbol | |
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| ID | 3924779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1139275 |
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| End bp | 1142070 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637896649 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_502480 |
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| Protein GI | 88602302 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0783808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0479859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTGA TTATTGCCGA AAAAAACATT GCAGCAAACC GGATAGCACA GATCCTTTCC
GGAAAGGATA AAGTTTCGGC AAAAAAGGAG GGTGGGGTGA ATGTATACAC CTTTGGCGAC
AAGATATCAA TCGGACTTCG TGGCCATGTG GTTGAGGTCG ATTTCGTTGA AGGGTATACC
AACTGGCGGT CACAGGAACG ACCTCCCCGG TCATTAATCG ATGCAGAGAC CATTAAACGT
CCTACAGAAC CTGCAATAGT AAAATTGATC CATAAAATAG CCAAAAAGGC AAACCGTGTT
ACCATAGCAA CTGATTTTGA TACCGAAGGG GAACTTATCG GGAAGGAGGC ATATGAGCTG
GTCCGGGCAG TCAATCCGAA AGTGCCCATT GATCGTGCAC GGTTTTCAGC TATTACCAAG
GAAGAGATCA ACCGGGCCTT TTCAGAACCC AGTGATCTGG ATTTTGATCT TGCAGCGGCA
GGGGAAGCCA GGCAGGTAGT TGATCTCATC TGGGGAGCAT CACTTACCAG GTTTATCAGT
CTGGCTGCAA AACGGGGTGG AGGAAACATA CTTTCCGTGG GACGTGTCCA GTCACCAACA
CTTGCGATGA TAGTTGATCG CGAGAAAGAG ATTGAGTCTT TTATTCCCGA ACCCTACTGG
GAGATCTCCC TGACAACTGA GAAAGATGGT CAGTCTATTA TTGCACGTCA TGCAGAAGGC
CGTTTTACTG ATAAGAAACT CGCCGATGCG GCATATGCCG GGACAAAGGA TCCGCTTGTT
GTTACCGAAG TCAAGGAAGG AAAACGGGTA GACCGGGCGC CGACTCCATT TGACACAACC
CAGTTTATCG TTGCCGCAGC ACGGATTGGT TATTCTGCAG CAAATGCAAT GCGAGTTGCA
GAAGAACTCT ATATGAACGG ATTTATCTCA TATCCGCGTA CAGACAATAC CATCTATCCT
CCATCCCTGA ACCTTGACAA TATTCTGACC ACGCTAGAAA AGACAAAATT TGCCCGGGAT
GTTGCTTGGG TCAGGAAAAA CAGGCGGACA AAACCGACCG AAGGAAAGAA ATCCTCAACC
GATCACCCTC CAATCCATCC GACAGGTGTT GCGACCGAAG AGCAGCTTGG TGAGAACTGG
AAATTGTATG AACTGGTAGT ACGCAGATTC CTTGCAACCC TGTCACCAGA TGCCGAGTGG
GCAACCATGC GGATCGGGAT GGATGCAACC GGACAAAATT ATGTTGCAAC CGGATCCCGT
CTGACCGAGG CCGGATGGAG GACGGTATAC CCATACTCAG AGGCGAAAGA TTCCATCCTC
CCTGTAGTCA AAAAGGGAGA AAAACTGAAG ATACAGGATC TGAACCTTGA AGAGAAGCAG
ACGCAGCCAC CACCGCGGTA TTCACAGAGT AAACTTATCC AGGTGATGGA AGAGCTGGGT
CTTGGGACAA AATCCACCAG ACATGAAGTG ATCCAAAAGC TCATCTCCCG TAAATATATC
GAAGGAAATC CACTCCGGCC AACTCTTGTC GGGAAAGCTG TAACTGAATC ACTGGAAGCG
CATGCTTCAA CCATCACCAG ACCTGATATG ACCCAGAAGC TTGAACAGGC GATGGAAGCT
ATCAAGGTCA GAAATAAGTC CCGTGATGGG GTGGTTGATG ATTCCCGAAA GATGCTTCAT
CAGGTATTTG ATGAATTGGA ACCAAATGAG GCAGTCATCG GCCAGGAGAT TATGGGTCAG
ACAGATGAAG AGCTGACCAT CGGACCATGC CCGGTGTGCG GAAAGGATCT TCGTATTCGT
CGGAAGGGTG GTTCTCAATT TATCGGGTGT AACGGGTATC CGGACTGTAC TTGTAACATA
TCTCTTCCAG GGACGATGTG GGGATCAGCG GTCAGGACAA AGAAGGTCTG TGAGGTTCAT
AATCTCTTCC ACGTCAGTCT TATCGCAAAA GGTGCCCGAC CGTGGGAGAT GGGATGTCCG
CTCTGTCAGC TCATCGAGCA GCAGAAAGAG CACTATGCAA AGATGCCCGC AATGACCGAG
GCTCTTCAGC AGAAACTTCT TGATGCAAAG ATATTTTCAT TGTATGAACT CTCGAAACTG
GAGCCTGCAG TTCTGGCGAA AAAGCTAGGA ATCACCAAAA AGCAGGCTGA AACGTTAATT
CATGAAGCAA ATGACGTTCT TGATCTCATC CGGAGAAGAT CGGAATGTAA AAAGTTCATG
AAGCAGTTTG TACCCCCAAA ACGGGGCCGG AGTCATACAA AGGTCATGAA CGGTTTTACC
GAGTCGGGGA TAAACTGCAT CGGAGACATT GCATCGGCTA CCATTGAATC ACTAAAAAAG
ACCGGACTCT CCGAAGAAGA AGCAAAGACA TTAAAAAGTG AAGCCATCTC CCTGATTGCG
AAAAACCAGC TTAAAGATAT CGGCATTCCT GCCGTATCAC TAAAGCGGTA TCAGGAAGCC
GGTTTTTTAA CACCAGAAGA TATCGCCTCT GCTCATCCGG CATACCTTGC ATTCAAGACC
GGCATCTCCA TTGAGACGGT TGGAAAGCAC GCAACCCTGA TTACGCAGTC ATTAGGAAAG
CCGGATCCGG TAAAGATATC CAAAAAAGCA TTTGAATCAG GGAAAATTGA ACTTACCTCC
CTTCCCGGGG TCGGGGAGTC TACCCTTGAG CACCTGTATC GAGCTGGAAT CTTTGATAAA
AAATCCCTTA TTTCTGCAGA TCCGGCTAAG GTTGCAAAAT CAGGTGGCCT GTCAAAAGAT
CATCTGAAAA AACTGCAGGC TGCAGCAGTG GTATGA
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| Protein sequence | MHLIIAEKNI AANRIAQILS GKDKVSAKKE GGVNVYTFGD KISIGLRGHV VEVDFVEGYT
NWRSQERPPR SLIDAETIKR PTEPAIVKLI HKIAKKANRV TIATDFDTEG ELIGKEAYEL
VRAVNPKVPI DRARFSAITK EEINRAFSEP SDLDFDLAAA GEARQVVDLI WGASLTRFIS
LAAKRGGGNI LSVGRVQSPT LAMIVDREKE IESFIPEPYW EISLTTEKDG QSIIARHAEG
RFTDKKLADA AYAGTKDPLV VTEVKEGKRV DRAPTPFDTT QFIVAAARIG YSAANAMRVA
EELYMNGFIS YPRTDNTIYP PSLNLDNILT TLEKTKFARD VAWVRKNRRT KPTEGKKSST
DHPPIHPTGV ATEEQLGENW KLYELVVRRF LATLSPDAEW ATMRIGMDAT GQNYVATGSR
LTEAGWRTVY PYSEAKDSIL PVVKKGEKLK IQDLNLEEKQ TQPPPRYSQS KLIQVMEELG
LGTKSTRHEV IQKLISRKYI EGNPLRPTLV GKAVTESLEA HASTITRPDM TQKLEQAMEA
IKVRNKSRDG VVDDSRKMLH QVFDELEPNE AVIGQEIMGQ TDEELTIGPC PVCGKDLRIR
RKGGSQFIGC NGYPDCTCNI SLPGTMWGSA VRTKKVCEVH NLFHVSLIAK GARPWEMGCP
LCQLIEQQKE HYAKMPAMTE ALQQKLLDAK IFSLYELSKL EPAVLAKKLG ITKKQAETLI
HEANDVLDLI RRRSECKKFM KQFVPPKRGR SHTKVMNGFT ESGINCIGDI ASATIESLKK
TGLSEEEAKT LKSEAISLIA KNQLKDIGIP AVSLKRYQEA GFLTPEDIAS AHPAYLAFKT
GISIETVGKH ATLITQSLGK PDPVKISKKA FESGKIELTS LPGVGESTLE HLYRAGIFDK
KSLISADPAK VAKSGGLSKD HLKKLQAAAV V
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