| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0994 |
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| Symbol | rfc |
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| ID | 3924041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1117549 |
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| End bp | 1118520 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637896631 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_502463 |
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| Protein GI | 88602285 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.265102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.191705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAGA CACACGCCAT TTGGATAGAG AAATACAGGC CACGGGTTTT GGAAGATATC
ATCGGACAAC AGGAGATAAT TGAAAGGCTT CGTTCATATG TAGCGAAGCG TGAGATGCCG
CATCTGCTCT TTACCGGAAA TGCAGGAACC GGGAAGACAA CCGCTGCAGT TGCTCTGGCA
CGTGAATTTT TTGGTGAAGA CTGGCAGATG AATTTCCGCG AACTGAACGC ATCTGATGAA
CGGGGTATCG ATGTCGTTAG AAATCAGATC AAGCAGTTTG CCCGGACTTC GCCTTTTGGC
GGATCAACAT TTAAAATTCT CTTCCTTGAT GAGGCTGATG CCCTGACAAC TGATGCACAG
TCTGCTCTTC GCCGGACAAT GGAGACCTAT GCACAAACGT GCCGGTTTAT TCTCTCCTGT
AACTATTCGG CGAAAATTAT TGATCCCATT CAGAGCAGAT GTGCAATTTA CCGCTTCAGA
CCGCTCGGGC GACAGGCTGT TTCTGAAATG GTGAAACGGA TAAGTGCTGA TCAAAACCTC
ACGGTGACAG AAGAAGTCAT TGATGCAATA TTTTACGTCG CTCAGGGAGA TATGAGGAAA
GCTATTAATG CATTGCAGGG TGCAGCGATT CTTGGCAGGG ATATCAGTCC GGATATGATC
TTTGCAATAA CAGCAACGGC ACGTCCGGAA GAGATTGATG ACCTTATTGA CCTCAGTCTT
GCCGGTAATT TTCTGGGAGC GGGGAGTTCT CTTCAGGCCT TACTTCATGA CCGTGGCATT
GCCCCTCAGG AGCTCATTAG TCAGTTATAC CGTGCGGTGG TCAAACGGGA TCTCCCCGAG
GCGGTGAAGG TCCGGCTTAT TGATTCACTC GGAGAGACGG ATTTCCGGTT ATCAGAAGGA
GCCGGAAGTG ATATCCAGAT GCAATCCCTT ATTGCAAAAT TTGTGATGTA CGGTGGTAGG
AACAGTCGGT AA
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| Protein sequence | MEETHAIWIE KYRPRVLEDI IGQQEIIERL RSYVAKREMP HLLFTGNAGT GKTTAAVALA
REFFGEDWQM NFRELNASDE RGIDVVRNQI KQFARTSPFG GSTFKILFLD EADALTTDAQ
SALRRTMETY AQTCRFILSC NYSAKIIDPI QSRCAIYRFR PLGRQAVSEM VKRISADQNL
TVTEEVIDAI FYVAQGDMRK AINALQGAAI LGRDISPDMI FAITATARPE EIDDLIDLSL
AGNFLGAGSS LQALLHDRGI APQELISQLY RAVVKRDLPE AVKVRLIDSL GETDFRLSEG
AGSDIQMQSL IAKFVMYGGR NSR
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