Gene Mhun_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0993 
Symbol 
ID3924040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1117065 
End bp1117568 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content44% 
IMG OID637896630 
ProductCheW protein 
Protein accessionYP_502462 
Protein GI88602284 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.165537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.34586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGGAA CAGTCGGTAA TCCCAGTTTT TCTCAATCTT CAGTCTGTGA AGATTCTAAA 
GATATCCTTG TTTTTACTGT CCGGAATGTA CGGTTTGGTA TTCCTGCTGT CCTTCTGGAT
CATGTCATCC GTATGGTTGC CATAACACCG GTGGATGATC CTCCCCGTGG CATTGTCGGG
ATTATCAATT ATCATGGTGA TGTCCTTCCG GTCTTCTCCT TCAGAAGATA TCTCTCACTT
GATGAGAAGT CACCTGCCAT TCAGGATTTT TTAATCATCG TCAAGGAGGA GCGACATATG
GCGATTATTG CAGAAACCAT CTCCGGGGTA TATCATATTG AGGATGAGGT CATCTCTCCT
GAACAGCTCT GTGCTGGCAT GAAGGGCATC ACCGGCATAT ACCGGTGTGA TGATGGTCTT
TTGATTATTT CGCATCCGAA AGATCTGCTG GGTATTGAAG ATCAGGAGAA AATCAGTGCC
ATAAGGGAAT ATCTTGATTT ATGA
 
Protein sequence
MVGTVGNPSF SQSSVCEDSK DILVFTVRNV RFGIPAVLLD HVIRMVAITP VDDPPRGIVG 
IINYHGDVLP VFSFRRYLSL DEKSPAIQDF LIIVKEERHM AIIAETISGV YHIEDEVISP
EQLCAGMKGI TGIYRCDDGL LIISHPKDLL GIEDQEKISA IREYLDL