| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0935 |
|---|
| Symbol | |
|---|
| ID | 3923057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1036719 |
|---|
| End bp | 1037714 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637896571 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_502404 |
|---|
| Protein GI | 88602226 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0141741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT CATTAATGCA TGGAGCAGGT GGAGAGGTTA TGGGTGAAGT TGTTGACCTC
TTCTCTAAAA TTACCAATAC TAATGCCGGA GGGATAGGTC TTGAAGCGCT TGACGATGGA
GCAGTCATTC CCATTGGAGA TAGGCAGGTA GTCTTCACCA CCGATTCGCA TGTAGTAAGG
CCCCTCTTTT TCCCAGGTGG CGATATCGGG CGGATTTCAG TCTGCGGGAC GATAAATGAT
ATCGCAATGA TGGGTGGGAG ACCTCTCGCA CTTTCCTGTG GACTCATAAT CGAAGAGGGA
TTTGATTTTG ATACATTGTC CAAAATTGTA GACTCCATGG ATAGAGCCCT TTCAGAGGAA
AATGTATCAC TCGTTACCGG TGACACCAAG GTAATGGAAA AGGGGGCATT GGATCAGATT
GCAATAAATA CTGCTGGAAT AGGTGTTGCG GAGACTATCG TCAGAGACAA TGGACTCATA
CCTGGTGATG CCATCATTGT ATCAGGAACA CTCGGGGATC ATGGATTTGC TGTTCTTGCA
AGCAGAGAAG AGTTTGATTT TGCAGATCAG ATAATTTCAG ATGTTGCTCC TCTATCAGGA
ATGGTCCATG CTGCCATGAA CGCGGGAACC ATTCATGCCA TGAAAGATCC GACTCGGGGC
GGATTTGCAA GTGCCATCAA TGAAATGGCG AAAAAATCAA AGGTCATGAT CCGCATATCC
GAAGAGGAAG TTCCGATCCG ATCATCAGTA CGAGCTGCAT CACAGTTACT TGGAATCGAT
CCGCTTGAAG TGGCAAATGA AGGAAAAGTA GTCATGGGAG TTCCGGCAGA TGATGCAGAA
ACTATTCTGA AAGTATTGAA GGGACACAGA TATGGAAAAG ATGCAGCAAT TATCGGAACT
GTTCAGGAAG GAACCGGAGT AATTATGGAA ACGGCAGCCG GGGGCGAGCG GTTTATAGAG
ACACCCATGG GTGATCCGGT TCCGCGTGTC TGCTAA
|
|---|
| Protein sequence | MKISLMHGAG GEVMGEVVDL FSKITNTNAG GIGLEALDDG AVIPIGDRQV VFTTDSHVVR
PLFFPGGDIG RISVCGTIND IAMMGGRPLA LSCGLIIEEG FDFDTLSKIV DSMDRALSEE
NVSLVTGDTK VMEKGALDQI AINTAGIGVA ETIVRDNGLI PGDAIIVSGT LGDHGFAVLA
SREEFDFADQ IISDVAPLSG MVHAAMNAGT IHAMKDPTRG GFASAINEMA KKSKVMIRIS
EEEVPIRSSV RAASQLLGID PLEVANEGKV VMGVPADDAE TILKVLKGHR YGKDAAIIGT
VQEGTGVIME TAAGGERFIE TPMGDPVPRV C
|
|---|
| |