Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0768 |
Symbol | |
ID | 3922006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 880525 |
End bp | 882768 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637896404 |
Product | hydrophobe/amphiphile efflux-3 HAE3 |
Protein accession | YP_502239 |
Protein GI | 88602061 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.53096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.282667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCCA TTTTTGAAAG CATCTCATCC CTCGTAGTGA ACCGGCCTAA ACTGGTTCTT GGAGCACTTT GTCTCATTTT TATTGCCTCG ATTGTGGGAA TGTCGATGCT TAAGATGCAA ACCGGAAATG AAACATACCT TGACAAGAAT ACCCCGAAAG GTATTGCATT CTCTCATTAT GAGGATACTT TCAGTCAGGA TACTCTCGTC ATTCTTATTG AGAGTAATGA TCCATTAAAC CCTGATGTTA TCGCATACCT GGATAAAATT ACTCCGGGAC TGAAGAATTT ACAGTATATT AACTCGGTTT CAAGTATAGC AGACCTTGTA AAACAGGCAA ATAACGGGAA TATACCAAGG TCTTCAGGAG AAATTAAAAA TATTAAAGAG AGTATTTCCT CGGAAGTTTT AAACCATTAC ATTCCTTCCA ATCTGCTGAC TATGATGATG GTCAAACTTG ATGTGGGAAT GACCGATCAG AAACAGAAGA GTGTCATGAA TAATGTCAGG TCATTTCTGA ACAGTTCACA TCCTCCACCG GGTGTTACGG TAACATTAAC CGGTAATCCG GTATTCCAGC AGGAGATGGG GCAGGAACTG AGTAAATCCA TGGGAACCCT GATTATGGGT GCCATGGTCC TGATGGTTAT AGTGCTCGGT CTTCTATTTG CCTACGTCAG TCACCGGTTC ATTCCGGTTT TAATTGTTGC AATCGGATTA ATCCTTACCT TTGGTATCAT GGGACTATGC GGTGTACATC TTAACACTGC AGTTATTGCC GCATTCCCGG TCCTTATAGG GCTTGGTATT GATTATGCGA TACAATTCCA TGCCCGGTTG GAAGAGGAGG CACGAAAAGG ATCATTAATT GATGCGGTCA GAATTACTAT TACCAGAACC GGTCCGGCAG TTCTTTTTGC AATGATTGCA ACGACGATGG GTTTTATTGC AATGTTCATC TCTCCGGTGC CCATGATCCG TTCATTTGGT CTGGTCGCAA TCATCGGGGT TGCCGTCTGT TATATGACGT CGCTCATAGG CATTCCACTT ATCGCGATAT TAATCAAATA TAAACCGAAA GGAATATCTG GAGAGGAGAA GCCGACAAAA GCAGATTTGG TTCTTTCAAA GATTGCAGTC ACCATTGCGA AAAATCCGCT TCCTATCCTT ATGGTTGCCA TTCTCTTTGC GTTTATCGGG CTTCAGGTTG ATCCATCAAT TCCCATCTCC ACAAGCGAAC GGACCTTTGT TCCGTCTGAT ATGCCGGCGA AGATCTCTCT TGATAAAGTC AGCAGAACTA TCGGTTCGAC TACACCGGTT CCCATCCTTG TTACTGGTAA TAATGTCCTC TCTCCTGATG TACTTACATG GATAGAGACC TTCCAAAAGA ACGAACTCAG TTTGTATATG GAGATTACCG GGTCCACCAG TATTGTAGAT TATATCAAAA TTTACAACAA TGGGACCGTG CCGCAAACGC AGTTTGAAAT TGATGAAGTA ATATCCAAAA TACCAGAGGG AGTCAGGAAC GAGTTTTTAA ATGGCAGAAC AGAGACAATT ATTGAATTTT CTACAAAGCG TCTTGAGATG CCTCAGCAGG ATGAACTCAA GACACAGATG ACGAATGATC TGGTTCTTCT CACTCCGCCA CCCGGTATTA GTGCTTCAAT CACCGGAAGT TTTGATCTCT TTACGACTTT GATATCAGAT ATTTCTGAAA GTAAGGAGCA GATGACATTA CTGGGCTTTA TTCTGATAGT GGCGTTCCTT GCACTTATTT ATCGGAAGAT TCATGCCGTT ACTCCTATCG TTCCCATCGT CTGTATTGTC GGGTGGAATG CTGTAGCCAT GCTCATCCTA AACATCGATT ATACACCGAT GACTGCTTGT CTTGGTTCTA TGACCATAGG GGTTGCAGCA GAATACACGA TTCTTATTAT GGAACGATAT CTTGAAGAAC GAGAGACAGC AGCAAGCACT ATTGATGCAA TTCGTGAGAG TGTTCGAAAG ATTGGGTCCG CTATTATGGT ATCCGGATTT GCAACATTCT TTGGATTTTC TGCACTCATG CTCTCGAACT TTAATATGAT AAGTAATTTT GGTCTGACAA CCGTTATTGC CGTGTTATTC TCACTGATTG GAGCGGTTGC GATAATGCCG GCTGTGCTGT CTGTTCTTGA TGAACTTATC AAGGATGTCC ATACTATTGA GGATAAAGTT CTTCATCATC CTCATAAAGA ATAA
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Protein sequence | MRSIFESISS LVVNRPKLVL GALCLIFIAS IVGMSMLKMQ TGNETYLDKN TPKGIAFSHY EDTFSQDTLV ILIESNDPLN PDVIAYLDKI TPGLKNLQYI NSVSSIADLV KQANNGNIPR SSGEIKNIKE SISSEVLNHY IPSNLLTMMM VKLDVGMTDQ KQKSVMNNVR SFLNSSHPPP GVTVTLTGNP VFQQEMGQEL SKSMGTLIMG AMVLMVIVLG LLFAYVSHRF IPVLIVAIGL ILTFGIMGLC GVHLNTAVIA AFPVLIGLGI DYAIQFHARL EEEARKGSLI DAVRITITRT GPAVLFAMIA TTMGFIAMFI SPVPMIRSFG LVAIIGVAVC YMTSLIGIPL IAILIKYKPK GISGEEKPTK ADLVLSKIAV TIAKNPLPIL MVAILFAFIG LQVDPSIPIS TSERTFVPSD MPAKISLDKV SRTIGSTTPV PILVTGNNVL SPDVLTWIET FQKNELSLYM EITGSTSIVD YIKIYNNGTV PQTQFEIDEV ISKIPEGVRN EFLNGRTETI IEFSTKRLEM PQQDELKTQM TNDLVLLTPP PGISASITGS FDLFTTLISD ISESKEQMTL LGFILIVAFL ALIYRKIHAV TPIVPIVCIV GWNAVAMLIL NIDYTPMTAC LGSMTIGVAA EYTILIMERY LEERETAAST IDAIRESVRK IGSAIMVSGF ATFFGFSALM LSNFNMISNF GLTTVIAVLF SLIGAVAIMP AVLSVLDELI KDVHTIEDKV LHHPHKE
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