| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0723 |
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| Symbol | |
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| ID | 3923150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 829598 |
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| End bp | 830635 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637896360 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_502195 |
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| Protein GI | 88602017 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0862368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0366717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCCGGA TATTTCAGAC TGAAAACGGA ATTTTTCGCG GTTATATTGG TGAATATAGA
AATGCAGTCG GAATGCTCAC AGAAGAGATA AAGAAGAATC CTGCTGATTA TTCGCTTCGT
GTTGCGTTAG CACGGGTCCT ATTTGAACTC AGGCAGGACA GAGAAGGATT TCATCAGTTA
TCAATGGCGA TAGAGAACGG AGAGGAAGAC AATGAAACTC TGGAATTGAT GAATGCAGCA
TTGAATGCAC TCAGTCTAAA CTGTTTCATT GATGAGTATA AGCGGATATC TCAGGGTGAT
GTGGTAAGGT TTGCTAAACT GGTGTATGAG CAGGCTGTCC GCCAGAACAG GTTCGGAGTT
AGGAGACAGG CGATTGACGT CTGCAGGTTC CTGACAGGTC TTTCATCATC AGATCCAGCA
GTTCTGAGTA TCAAGGCCGA TGCATGTCGT ATACTCGGAG ATCTTGAGGA GGATCCGGAG
AGGTATGAAC AGGGGATAGC ACTATACAAT GAGCTGCTTT CAGATGATCC TGATAATGCC
CGGTACCTGG CATATAAAGG GCTTCTTTTA GATAATCTTT CCAGGTATGA GGAAGCTGAG
GATGTTCTCG TCCGTGCTCT GGAGCTTAAT CCCGATTCGG GTGTTGCAAA TTCAGCTCTG
TGTTGGTGTC TGGCAGCTAT CGGACGATAC CAGGAAGCGT TATTGTATGG CAACAAAGCC
ACGATTCAAA TCCCTGATGA TTGGGGAGCC TGGAACAATC GGGGACTTGC TAAACTAGGA
CTTGAAGATT TTGAAGGGGC GGTATCAGAT TTCAAACAGG CAATCAGGTG TCATCCGGGA
GAGCTAATCC CGAGGAATAA TCTCTGTGAG GCTCTCCTCT CTCTTGATGA TGCTGATGCC
CAGGATGCTT TTGTGGATCT TTTGTTCAGA TTCGGGTACA TGGCATTTCC TGTTAAAGAG
GTGGAGGAGT CATGGAGTGT TCCGGGTTTG AACCGGGATC ACAGAACCAT TACCGGCTAT
ATGGATGGGT ATTGGTGA
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| Protein sequence | MVRIFQTENG IFRGYIGEYR NAVGMLTEEI KKNPADYSLR VALARVLFEL RQDREGFHQL
SMAIENGEED NETLELMNAA LNALSLNCFI DEYKRISQGD VVRFAKLVYE QAVRQNRFGV
RRQAIDVCRF LTGLSSSDPA VLSIKADACR ILGDLEEDPE RYEQGIALYN ELLSDDPDNA
RYLAYKGLLL DNLSRYEEAE DVLVRALELN PDSGVANSAL CWCLAAIGRY QEALLYGNKA
TIQIPDDWGA WNNRGLAKLG LEDFEGAVSD FKQAIRCHPG ELIPRNNLCE ALLSLDDADA
QDAFVDLLFR FGYMAFPVKE VEESWSVPGL NRDHRTITGY MDGYW
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