| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0425 |
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| Symbol | |
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| ID | 3923988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 488545 |
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| End bp | 492240 |
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| Gene Length | 3696 bp |
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| Protein Length | 1231 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637896066 |
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| Product | PKD |
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| Protein accession | YP_501908 |
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| Protein GI | 88601730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGG TGATGAAAGG AATCGGAGTC TGTCTCCTGA TCCTTCTTCT TCTTGCAGGT
ATAGCGCCGG CAATGGCAGA GGATGTGGAG ATTAAGCAGC TGGTCCCGAT GTTTCTGAAA
GGGACGGTTT ATATCGGAGA TACACCTGCA AAACCCGGAA TAACAGTGGA ATCTGACATC
CTTGGATTCT GGGGTGGTTC GGCTGTAACA ATGTCGAATG GAACATACGG AACGGAATCT
CAGCCGATGA TGGTTCAGGC AGGAGCAAAC GAGACACTGA AAGGTGAACC GGTTACCTTC
TGGCTGAATG GAGTAAAAGC TGAAGAAACA ATTCTGTATC AGCCAGGTAT CAACCTTGAC
CTTGACCTGC ATTTCTCTAG TGCAGCAGAG AATAAGTTAA CCGTAATTCC TCAGGGAGGA
GACGTCTTCA TTGGTGAGGA GGGACTTGAT GTATCCCTGT TCCTGAAGAG TGGAGATACT
ATCGCCTGGT TTGACCCGAC TTCAGAAGCA TATCTTACCG AACCAGTTGG TTCTATTGTT
ATCGACAACC CGAAGCAATT CTTCATTGAC CCGGCACAGT TCATGAATCG TACTGGCAGA
TGGTGGATCT GGTCCGGAGA TAAATCCAAG CAACTTGCAT TTATTGTAAA AGATCCATCC
ATTGCTCTTC GTATATGGAA TCAGAACGAA GACCAGGATA TTAATGAGGA TGGAGGAAAG
ATTCCGGCAG GGAACTTTGT AAACTTCCGG ATTGAATCAA ATCTTTACTC TGCAATCATT
CAGCGAGGAA AAGGACTTGC ACCTGAAGAC CTTGGTATCA TCAACATGGT CGGGTCTTCC
AACGTGACTC AGGTGACCTA TAAATTCCTC CGTGGAACCC TCAATGGAGT TCCAGACTCA
GATATTGCTC TTCGTGAACT GGTAGTTGAT GCAAATCCAT GGTTCTGGCC GGATAATGAT
AAGACAACCT CCGGATGGAA TACTGGAGCA TTAGGAACTG ATCTAAATCG TTTATATCCG
AATGGCGAAT ACAACTTCTA TGCTGAAGTT GATCTGAATA ATATCAGAAA GAATTATCCA
GGAGATCAGA CTGGAAAAGC AATTACCAAG GTGATTCCGG CGGTTATTGC AGATGACTCG
ATAGATGTTA TCGTCAATCC GGGAACCGTA ACCCGTAATT CGTCCTTCTT CGTAACCATA
GGAGGAAGAC CGGGTAAAGA CTATATCATC GTTATCATGG AATGTGCACC AGGAGAAGAC
GATCCAAAGG ATTGCTGTGC TCTCAAGATG AGTGGTGCAC CCTGTGAGCG TCCACCGATG
ATCCGCCCCG ACCAGAGTGG TGTTGCAGAC GGAACAATCG GGTTTGACAG TAAGGAAGGA
CCGTTTACTA TCGGTGATAC AAAACTTTCA CCAGATTGCT GTGAGAAGAG TGGTACTATC
CGTTCAGTCG TTCCGACCGA TGACAAGCCC AACGCACGGG ATGTCTATGA GAATGGTGTC
TACTACTATG CTCAGGTCAG AACTGACAAT GATAACGAGC CAACTCCAGG ATATAAGACG
GTAGAATTTA CTGTCGGACC GGACGTTGCA CCTGACCGTC CATATCGTAT CCATGTGCAG
AGTGTCGAGT CTGATCCATC TCTGGTCATT GATGGAGATG CTCTTGTTCA GGTGAACAAG
GGAGTAGTTA CTCTTGATGT GAAAGAAGAG CCTCCATACT ATCTGGGCAA TGATATCACC
CTGTCAGGAA CCAATACCGA TAGTAATGTT GTCTACCTGT TCATGACCGG CAGCCAGTGC
CAGAACAAGT GTGGAAATGA CCTCCTTGGA TGGAAACGTC CGGACGAGAC TGAAAACATC
ATCCAGCCAG GACTAGATAT GATTGAGCTT GGCTGTAAGG AAGAGTCTGA TCAGTTCACA
ACCATTGCAG TTCCGGTCAA GAGCGACGGA ACATGGACCT ACACCTGGAA GACTCAGAAG
GCACCGATTA ATCCGGGAAC ATACACCGTC TATGCATCCA GTCAGCCGAT CAACGGATGT
TGTCTGGACT GTGCTTGTGC GGTCACCGCA TCACGTGATA TTATCCTTGA GGAGCCATGC
TTTGATGCAA TCCTCGAGCC GGATGTCATC ACCAAACCGG TTGAGTGCTG TCCGAATGGC
TGTAGCTGGA CCTCTATGGA TGAGATCATG CTGACTGGAA AGGCATGTGG GTTCCCACAC
ACCGGTGAAG GCGATAATGT CACTAAGGAG ATCAACATGT GGATCTTCGG AGAAGAGAAA
GTCGGCAATG ACAAGTATGT TAATGCAAAG ATTCCTGTCT TCTGCGATGA TACCTTTGAA
GTAAACCTGC TCAACTACAT CAACCTCTGT GATCTCAAAC CTGGTGCATA CAGCATCATT
CTGCAGCACC CGATGTATAA TCACAAGTTT GACATGGTAG AGGAGACCGA TGTCCGCGAT
CCAATCGAAT CCAACCGGAT CTGGATGGTT ACCTCCTATC CGGATGAGTG GAGCAAGCTC
TTCCCACTCG ACGGTCCGGG TTACTACCAG GGTGAGCAGG CAGTCACTGC AATCAAGAAC
TTCCTTGACC AGCGGCTGGT GGATGACAAA TACATCATCC TCACCCTCAG AATTGTTGAT
GACCGGGTTC CAACCGCTGC ATTCAGTGCA GACCCGACCC AGGGAAGCAG ACCGCTTGAA
GTCCAGTTTA AGGATGAATC GACCGGTAAG AACCTGACTG AGCGATACTG GGAGTTTGGA
GACGGAACAA CTTCAACAGA GACCAATCCA AAGCACAGCT ACAGTGAAGC AGGTGTCTAC
ACTGTCTCCC TGACGGTCAT GAACAAGGAA GGAGCAAAAG ACACTGCAAC AAAGCCTGAT
TACATTACCG TTCGTGAACC ACGGATTAAA GCAGACTTCG TTGCAAGCCC CACCTCAGGG
GCAGCACCCC TTTCCGTCAA GTTCTCTGAC AAGTCAACCG GATCACCAAC CAACTGGTTC
TGGGACTTTG GTGACGGATT CACCTCCGCA GGAGTAAAAG ATCCATCCCA CGTCTACCAA
TATGGTGGCA AGTACACGGT TACCCTGACC ATCACCCTTG GTGATGAGAT CGACCGGGCA
ATCAAGAAAG ATTACATCAC AGTCATCGGG GGACCACAAC CGACCCCGAC CATCGGACCA
TATGATCCGA CCAAGATTCA GCTATATAGT GGCTGGAACT TCATCTCCGT AGCACGGACC
CTTGCTGATG GATACAGCAA TGCAAGTGCG GTATTCCGCG ATGTTCCAAC CGGTGGACAT
GCAATCTGGG CATATGATCC GGCACGGCAG TACTGGGATC AGGTTCTGAC CCAGACGGTT
ATAGCACCAT TGAATGGATA CTGGATCTAC TCGGTTACTC CGTTTACGAT TAACCTGACA
TTCAAGAACG ATCCAATCAG TGCTCCAGTT ACCAGAAGCC TTCCAACCGG ATGGGCAGCA
ATCGGATTTA CCGGAGGTAC CCCTGCAACC GCAAAGGACA CCCTGAAATC AGTCAAGGAT
GCATGGATTT ATGCCCGTGG CTATGATGCA CAGCACCAGC AGTGGGAAGC AACCATTGTG
AACGGTGGAC AGGGTGAGAA CACGTATCTC TTCCCATCGA GGGGATACTG GCTCTACATG
GAAAAGCCTG GAACACTGGC TGCCATTGGT GTGTGA
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| Protein sequence | MSMVMKGIGV CLLILLLLAG IAPAMAEDVE IKQLVPMFLK GTVYIGDTPA KPGITVESDI
LGFWGGSAVT MSNGTYGTES QPMMVQAGAN ETLKGEPVTF WLNGVKAEET ILYQPGINLD
LDLHFSSAAE NKLTVIPQGG DVFIGEEGLD VSLFLKSGDT IAWFDPTSEA YLTEPVGSIV
IDNPKQFFID PAQFMNRTGR WWIWSGDKSK QLAFIVKDPS IALRIWNQNE DQDINEDGGK
IPAGNFVNFR IESNLYSAII QRGKGLAPED LGIINMVGSS NVTQVTYKFL RGTLNGVPDS
DIALRELVVD ANPWFWPDND KTTSGWNTGA LGTDLNRLYP NGEYNFYAEV DLNNIRKNYP
GDQTGKAITK VIPAVIADDS IDVIVNPGTV TRNSSFFVTI GGRPGKDYII VIMECAPGED
DPKDCCALKM SGAPCERPPM IRPDQSGVAD GTIGFDSKEG PFTIGDTKLS PDCCEKSGTI
RSVVPTDDKP NARDVYENGV YYYAQVRTDN DNEPTPGYKT VEFTVGPDVA PDRPYRIHVQ
SVESDPSLVI DGDALVQVNK GVVTLDVKEE PPYYLGNDIT LSGTNTDSNV VYLFMTGSQC
QNKCGNDLLG WKRPDETENI IQPGLDMIEL GCKEESDQFT TIAVPVKSDG TWTYTWKTQK
APINPGTYTV YASSQPINGC CLDCACAVTA SRDIILEEPC FDAILEPDVI TKPVECCPNG
CSWTSMDEIM LTGKACGFPH TGEGDNVTKE INMWIFGEEK VGNDKYVNAK IPVFCDDTFE
VNLLNYINLC DLKPGAYSII LQHPMYNHKF DMVEETDVRD PIESNRIWMV TSYPDEWSKL
FPLDGPGYYQ GEQAVTAIKN FLDQRLVDDK YIILTLRIVD DRVPTAAFSA DPTQGSRPLE
VQFKDESTGK NLTERYWEFG DGTTSTETNP KHSYSEAGVY TVSLTVMNKE GAKDTATKPD
YITVREPRIK ADFVASPTSG AAPLSVKFSD KSTGSPTNWF WDFGDGFTSA GVKDPSHVYQ
YGGKYTVTLT ITLGDEIDRA IKKDYITVIG GPQPTPTIGP YDPTKIQLYS GWNFISVART
LADGYSNASA VFRDVPTGGH AIWAYDPARQ YWDQVLTQTV IAPLNGYWIY SVTPFTINLT
FKNDPISAPV TRSLPTGWAA IGFTGGTPAT AKDTLKSVKD AWIYARGYDA QHQQWEATIV
NGGQGENTYL FPSRGYWLYM EKPGTLAAIG V
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