| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0313 |
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| Symbol | |
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| ID | 3925227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 350656 |
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| End bp | 352533 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637895959 |
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| Product | type II secretion system protein |
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| Protein accession | YP_501802 |
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| Protein GI | 88601624 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.549227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.205186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCA TATCTCCCCG GCAGGTGGAT GCATGGCTTG AAGGAACCAA TATTCGAAAA
TATATCCGGG CAGCTCATCT TCCATATTCA CAATATTCCT ATTTTTTACT GTTACTCAAA
TGCAGCATAG CATCAGTCAG TATTTTTGCA ATTCTGACCA TTTATATACT ATCTCTACCT
GATGATGTCC AGCTCATTCC AGGAATGGCC AATATCTATA CAATCCTTAT CGCATTTGTC
CTCCTCGTAC CTGGTGTTAT CATTGGCATT TTCACCTATC CACAGACAGT TGCCACAGGG
AGAAAATCCT CTATCGATCT TGATCTTCCC TATGCAATCA CATATATGCA GGCCCTTTCC
ACGACTATGA CATTATATAA TGTCATCCGG AAGATTTACG AGGCTGATGA TCTTTTTGGA
GAGGTGGGAA AGGAATTCGG GCTCATTGTC AGAGACGTAG AGGTCTTTGG TGATGATCTG
TATACCGCTA TCAGAAACCT GCAAAAAGTA ACCCCATCGA AGAATCTTGA AGAATTTTTA
AATGATCTCC TTCTTCTCTC AAACAGTGGA GGAGACGTGA CAAATTTTCT CTCATCCCGG
TCTGCATATT TCAGGGAGTC TGCAGCTCGT GAACTGGAAT CAATATTAAA AACGATTGAG
GTGATGGCGG AGGTCTATGT AACGGCTTTC GTGGCCGGAC CTATCACGAT GATCATTATC
ATTGTGGCAC AGAACCTGGG AGGAAAATCC GATCTTGCCG GATATATGCC GCTGATTATC
ATCGGTCTTG CTCTTGGATC AATAGGGATG ATTTACATCC TATACTTGAT GCTCCCCTCC
ATTAAAATGG ATATTACGAG GAAACCTAGA GAGGAATCTG AATTTTCCGA TGTAATGATA
GGGAAAGAGG AATATTCAAA GGTTGACAAG AGTTTTTTAA AGAGGGTTGA AGCAAAGAGA
AAGCGATTCA AACTGGAGAA TTTACTGAAA AATCCGGCAC GTGCATATAT TTCCGATTAT
AATTATGGAA TAGCACTTGG ATGTGTGTGT GGCGGAATTG TATCTGCACT CTATTACCTG
GGTTATCTGA ATGAATGGAT ACCGGGGATG TCTCTGGAAG CATTCATAAG TCTGCTCATA
ATATTTTCAC TGGCTCCACC CTCTCTTGCA TATGAAGGAA GAAGCTGGTT TGTGAACAGT
GTAGAATCTC ATACTCCGGA ATTTCTCCGT CAGCTCGTAG ATATGAAAGA TGTGGGAGTT
ACGTTGCAGA CGGCCATCAG TCTGATCTCC AATTCAAAAC TCGGGGTGCT TTCACAGGAA
CTGGTCATGA CATCAGAGGA TATCAGGAGA GGGGCAACAA CCATTAACGC CCTGGTCAGG
ATGGAAGATC GAATCGGACT GGTATCAGTC AAACGTGCTA TCTCACTCCT GGTCAAGGCA
AGCGAGGTGA CCGATTATAT CAAGGATGTC CTGATTATTG CCATCAATGA TTTCGAGCAT
TATCTGAAAT TAAAGAAGGA CCGGTTTAAT ATTGCGATCA CGTACGTGAT GATTGTGTAC
CTGGCCGTAG GGATTTATAT GTATACCGCT TATTCCCTGA ATGTCTCCTT TGTATCATCT
TTTACGAATT TCAATATCTC ATTTGATACA TCCGGAAACC TGACCGATAT GTTCAGGATC
GGGTTGGTTC TTGGGTTTTT TTCCGGCCTT ATGGCCGGAC AGTTATCTGC GAACAGTGTT
CTGGCTGGTT TAAAGCATGC TATTCTTCTT GTCCTTGGAT GTTTTGTGTT ATTTGTTTTT
ATTATTCCAT ATCAGCTGGA TATTGCAGCC GAAGCGGCCA GGGTTGCGGC AGATGCAGCA
GCAAACGGAG GGGTGTAA
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| Protein sequence | MMFISPRQVD AWLEGTNIRK YIRAAHLPYS QYSYFLLLLK CSIASVSIFA ILTIYILSLP
DDVQLIPGMA NIYTILIAFV LLVPGVIIGI FTYPQTVATG RKSSIDLDLP YAITYMQALS
TTMTLYNVIR KIYEADDLFG EVGKEFGLIV RDVEVFGDDL YTAIRNLQKV TPSKNLEEFL
NDLLLLSNSG GDVTNFLSSR SAYFRESAAR ELESILKTIE VMAEVYVTAF VAGPITMIII
IVAQNLGGKS DLAGYMPLII IGLALGSIGM IYILYLMLPS IKMDITRKPR EESEFSDVMI
GKEEYSKVDK SFLKRVEAKR KRFKLENLLK NPARAYISDY NYGIALGCVC GGIVSALYYL
GYLNEWIPGM SLEAFISLLI IFSLAPPSLA YEGRSWFVNS VESHTPEFLR QLVDMKDVGV
TLQTAISLIS NSKLGVLSQE LVMTSEDIRR GATTINALVR MEDRIGLVSV KRAISLLVKA
SEVTDYIKDV LIIAINDFEH YLKLKKDRFN IAITYVMIVY LAVGIYMYTA YSLNVSFVSS
FTNFNISFDT SGNLTDMFRI GLVLGFFSGL MAGQLSANSV LAGLKHAILL VLGCFVLFVF
IIPYQLDIAA EAARVAADAA ANGGV
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