Gene Mhun_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0189 
Symbol 
ID3922963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp212071 
End bp213801 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content47% 
IMG OID637895839 
ProductABC transporter related 
Protein accessionYP_501682 
Protein GI88601504 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.087717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.574947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGAA GAACCGCATT TTTCCGGCTC TTCAAAGTTA TTATCCCACA GATACCGATC 
ATAAGTCTGG GAGTTCTCGC TGATATTCTG AAATACGGGG TAACCCTTCT TATCGGGTTA
TTGGGTGTCG ATCTGTTACG GATGGCACGG GAAGGAGCGG ATGCTTCAGT TCTTATCCCC
TGTGGGGTGC TCATCTGTAT TCTGGCGGTT TCCAGAGGAG TGTTTGGATA CTTGAGCCCA
TATCTCTGCC ATATCGGTGC ATACCGGCTG CTTGCAGATC TTCGGGACCA GTTCTACCGC
ATCCTAGAAC CACTTGCTCC TGCAATACTG ATGCATCGCC GAACCGGTGA TATGGTTTCT
GTTGCCGGGA ATAATATTGA AACGCTTGAA CTCTTCTTTG CTCATACTAT CGCTCCGCTG
ATAACTGCAA TCGTCATCCC CATCCTGGTC TTTGTATCGC TCTTTTCTAT CCATCCACAT
ATCGCAGTAA TATATGGAAT CTTCACGATC CTGATACTTA CTCTTCCAAG TCTTGCAATG
TCTTTGAATA ACGAACGGGG GGAGTGGCTT CGTGTGCTGG TTGGCGATAT CCATGCATTT
CTCATTGACA GTGTGCAGGG GATTCGGGAG ATCCTTGCAT TCTCACGTTC ATCATTCAGA
TATAATCAGG TAATGGACCT GAATGATGCC TACCAGGAAG AGTACGGCGT ATATGTTCAA
AAGAATTCGA TTATTACCGC GATATACATT CTGCTCCTTT CCGGAGGAAT AATTTCACTC
CTGGCAGACT CGTCACTCCT GACTGTTGCA GGATCTATCG ATCCACTTTA CCTTCCGATT
GTAGTCTTAT TTGCTTCAGT AGGGTTCAGC TCGATGGCGA ATGTCATTGA AATATCAAAA
CAACTCAGTC TGACCCTTGC CGGGGCAAAA CGACTCTATG ACCTGATGGA CTTAAAGCCC
CATGTTACTG AACCTGAACA GCCTGTCTGT CCACACGAGT TTCAACCGTC TATCTCGGTT
GATGGTGTTT CATTCCGGTA TTCTGATACA GATGTTGATG TTTTACAGGA TATCTCATTT
GATGTTCCCA TGGGAAAGAC CGTTGCTCTC GTAGGCATGA CAGGAGCAGG GAAGACAACG
ATTGCACATC TTATCATGCG ATTCTGGGAT CCTGTTCAGG GAATTATCCG GGTTGGAGGG
TATGATATCC GTACCCTCTC CCTTTCATAT CTCCTGAATA TGGTGGCGAT GGTTACGCAG
GATATTTTCC TCCTCAACAC TTCTATCATG GAAAATATCA GGCTTGGCCG GGCTGATGCA
TCAGACGGAG AAGTGATGGC AGCCGCTTTG TTTGCCCGGA TTCATGAGTT TATCTGTTCT
CTTCCGAATG GATACCATAC GATAGTCGGT GAACGGGGAA TCAGACTATC CGGAGGTGAA
CGACAACGAA TCGCCATAGC ACGGGCTGTT TTGAAAAATG CACCCATATT GATCATGGAT
GAAGCAACTT CCGCCCTAGA TACCTGTACA GAACTTGAGA TACGAGAGGC TATGAAGGAA
TTAAGTATGG GAAGAACGGT GCTCATTATC GCCCACCGTC TTTCCACTAT CATGCATGCC
GACCAGATTC TGGTCCTCAG GGAAGGAAAG ATAGTTGAAC GAGGAACACA TGAGGAATTA
ATCCGATTAA ACCAGGTATA TACCTCTTTG ATCAAGGCAC AGGAGATCTG A
 
Protein sequence
MRGRTAFFRL FKVIIPQIPI ISLGVLADIL KYGVTLLIGL LGVDLLRMAR EGADASVLIP 
CGVLICILAV SRGVFGYLSP YLCHIGAYRL LADLRDQFYR ILEPLAPAIL MHRRTGDMVS
VAGNNIETLE LFFAHTIAPL ITAIVIPILV FVSLFSIHPH IAVIYGIFTI LILTLPSLAM
SLNNERGEWL RVLVGDIHAF LIDSVQGIRE ILAFSRSSFR YNQVMDLNDA YQEEYGVYVQ
KNSIITAIYI LLLSGGIISL LADSSLLTVA GSIDPLYLPI VVLFASVGFS SMANVIEISK
QLSLTLAGAK RLYDLMDLKP HVTEPEQPVC PHEFQPSISV DGVSFRYSDT DVDVLQDISF
DVPMGKTVAL VGMTGAGKTT IAHLIMRFWD PVQGIIRVGG YDIRTLSLSY LLNMVAMVTQ
DIFLLNTSIM ENIRLGRADA SDGEVMAAAL FARIHEFICS LPNGYHTIVG ERGIRLSGGE
RQRIAIARAV LKNAPILIMD EATSALDTCT ELEIREAMKE LSMGRTVLII AHRLSTIMHA
DQILVLREGK IVERGTHEEL IRLNQVYTSL IKAQEI