Gene Mhun_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0060 
Symbol 
ID3923123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp78586 
End bp80706 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content46% 
IMG OID637895713 
Productserine phosphatase 
Protein accessionYP_501557 
Protein GI88601379 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0461367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TGAGAATTGG AGTCGCTGGA AAATTATTGC TGATAATGGT TCTGCTCACC 
AGTCTCATCT TCATCATTAT CGGCGGTATA TCATGGATTG TGATGGGGAA TCTGGGAGCC
TATGCAACAC AGTCCAGTCT TGCTCTTGGG GAACAAGCCA TAGGTGAGAG CACAACCGCT
CTGGAAGAGG ATGCAGAGAT CTATCTTCTC CGGCTTGTAA AAGACCAGGC AGAGATCACC
GATATGGTCT TTGAACGGAT CATTTCCGAG ATGAATGTCC TCAATGACTA TGGAAAAGTG
ATGATCAAAG AAAATAATGT GACTCCTGTT ACGTGGTATA CCCGTGATAT AAAGCCCGCA
AAACCAGGTG AGACGGGTAT CATCCATCTT TCTCCCGGAG TGACAGCAGA ACACGTTCTG
GATGAAATCA TGGCACTGAG TTCATTCCAG CCTGTTTTCA ATACCCTTTT CCATGCAGAT
AACCGGCTCA CTGCATTGTA TGTTACCTCT TCTTCAGGGA TCACCTTCAT CTTCCCCTGG
ACTCCACGAG TTGATCCTAC CTTTGAACCA CGATCCAGAA GCTGGTTTTT GGAAGCGGTG
AATAGTTCGC AATTCGTATG GTCTGATCCG TATGTTGATG TCTTAGGAAA TGGTCTTACC
ATCACCTGTT CGAAGGCAGT TCACAGTCCT GATAAAACCC GGACATGGGT CATTGGTTCT
GATATTACTA TTGAAACGAT TAACTACCGG ATTATCACCA CCCAGCTTGG TGAAGACGGA
TATGCATTTC TGATAAATCA GCGGGGGGAT ATTCTCTCCA GACCTGGTCT GAGCGCTGGA
GAGACCAGGT GGGATAAGTC ATACGAGACA GAGAATCTTC TTCAGAGTAC GAATGAAGAT
CTCAGAAAGG TTGCAGAAGA GATGACCAGG GGTCTTTCCG GTGTCAGTCG GTGCAGATTT
GCAGAAGGTG ACAAGTATAT CGCCTATGCA CCGGTAAAAA GTGTCGGATG GAGCATTGGC
CTTGTCGTAC CGGTAGAACA GGTAATCGGA CCTGCTCATA TCACCGGTTC AGTCATCCGC
CTGGCAAGTG AAGAAACCCA TTCACACATC ACCGAACAGA TGTCCTTTTT GCAAAAAATC
CTTATTACAA GTTTCTTTCT CCTTTTCATC GGAGTGACGG GTATTGCAAT ATTCTTCTCT
AAAATCATTA CCGGTCCTGT TATGATACTA AGTGAAGGGG CCAGACGAAT CGGGAATGGG
GATCTGCAGA CTCCGGTTGA GATACATACT GGTGATGAGT TTGAGGAGCT GGCCGGCGCC
TTTAACCGGA TGACAAATGA CCTTCGCAAT TATATTGTAG AACTTCGGAG AACCACCGCA
GAGAAGGAGC GATTTACGCG TGAACTTGAG ATTGCCCAGG GAATTCAGCA GAGTTTCCTT
CCAGACAACG TTCCTGATAT TCCTGGTATG GAACTTGCGG TATTTTCAAG CCCGGCTCTT
GAAGTTGGAG GAGATTTTTA TGACTTTATC CCGGTTGGTG ATGATCAGTG GGGGCTGGTT
ATTGCCGATG TGAGTGGGAA AGGTGTTCCA GCAGCACTGT TCATGGCACT CTCCCGAACC
CTAATCCGGG TAAGTGCTAC CTGGAAAAGC TCTCCTGCAA GTGCAATCAC TGAGGCAAAC
ACGCTTATCT GTCGTGACTC CAAGGCCAGT ATGTTTGTAA CGCTCTTTTA CCTGGTTATC
GACTCAAAGA AACGGCAGAT CACCTATGTT AATGCCGGCC ATAATCCTCC CCTGATGTTG
ACCGGAGGAG ACCAGAGTGA TATAACCCTT TTAAAGGCTG AAGGGATCGC CCTTGGAATC
ATCGATGATA TTGACCTTGC TTCGGTAACG GTGGATTTGA AGAAGGGAGA TATGGTTGCG
CTTTATACTG ATGGTATTAC CGAAGCGATG AACAAGGATG GAGAGGAGTA TGGAATAGAA
CGGTTTACTG AGGTTTTAAT GCAGAACCGT GACCTTGATC TTTCCGCACT CATTAATGCA
ATAAAGACAT CCATCAAAGA GTTTACAAAA GATGCTCCCC AGTCAGATGA CATCACTCTT
ATCCTCTTCA GGGCAGTCTG A
 
Protein sequence
MKRMRIGVAG KLLLIMVLLT SLIFIIIGGI SWIVMGNLGA YATQSSLALG EQAIGESTTA 
LEEDAEIYLL RLVKDQAEIT DMVFERIISE MNVLNDYGKV MIKENNVTPV TWYTRDIKPA
KPGETGIIHL SPGVTAEHVL DEIMALSSFQ PVFNTLFHAD NRLTALYVTS SSGITFIFPW
TPRVDPTFEP RSRSWFLEAV NSSQFVWSDP YVDVLGNGLT ITCSKAVHSP DKTRTWVIGS
DITIETINYR IITTQLGEDG YAFLINQRGD ILSRPGLSAG ETRWDKSYET ENLLQSTNED
LRKVAEEMTR GLSGVSRCRF AEGDKYIAYA PVKSVGWSIG LVVPVEQVIG PAHITGSVIR
LASEETHSHI TEQMSFLQKI LITSFFLLFI GVTGIAIFFS KIITGPVMIL SEGARRIGNG
DLQTPVEIHT GDEFEELAGA FNRMTNDLRN YIVELRRTTA EKERFTRELE IAQGIQQSFL
PDNVPDIPGM ELAVFSSPAL EVGGDFYDFI PVGDDQWGLV IADVSGKGVP AALFMALSRT
LIRVSATWKS SPASAITEAN TLICRDSKAS MFVTLFYLVI DSKKRQITYV NAGHNPPLML
TGGDQSDITL LKAEGIALGI IDDIDLASVT VDLKKGDMVA LYTDGITEAM NKDGEEYGIE
RFTEVLMQNR DLDLSALINA IKTSIKEFTK DAPQSDDITL ILFRAV