Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3319 |
Symbol | panC |
ID | 3915966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3542259 |
End bp | 3543119 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640446104 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_498588 |
Protein GI | 87201331 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAACCA TCAATCGGCT CGACGACCTG CGCCAGGCGG TGGACTCGCT CAAAAACGGG GGAAAAACCC TCGCTTTCGT ACCCACGATG GGCGCCCTTC ATGAAGGGCA CCTGACCTTG GTGCGCGAAG CGGCGCGGCG GGCGGACCAT GTTGTCGCCT CGATTTTCGT GAACCCGCGC CAGTTCGGCC CGAACGAGGA CCTCGACGCC TATCCCCGGC GCATGGCGAC CGACGCCGCG CTGCTCGAGG CGGAAGGCGT GGCGCTCCTC TGGGCGCCGA CCGTCGACCA GATGTACCCC GATGGCTATG CGACCAACAT CTCCGTGTCG GGCGTCAGCG AGGTCGCCTG CGGCGCAGCG CGGCCCGGCC ATTTCGATGG CGTGGCGACG GTCGTGTGCA AGCTGTTCAA CCAGGTTCGA CCTGATTTCG CGCTGTTCGG CGAAAAGGAC TGGCAGCAGC TTGCGGTGAT CCGCCGCATG GCACGCGACC TCGACCTGAC CCAGCCGCAC GTCGACAGGA TCATCGGCGT CCCCACCGTG CGCGAGGACA GCGGTCTCGC GCTGAGCAGC CGCAACCAGT ACCTGAGCGA CACCGAACGC GCGCAGGCGA CAGGTCTTTC GGCCGCGATG CGCCGCGCCA TCGCCGCGAT AGAGGGCGGT GCGGAGGTCG CCTCATCGCT TGCCGAACTG ACTCGCGAAA TTCTCGCCGC CGGCTTCGTC TCGGTCGACT ATGCCGACCT GCGCGATGCC GCAACGCTCG AGGAAGTCGT CCGCTTCGAA GGCCGCCCGG CGCGCCTCCT CGTCGCCGCC CGCATCGGCG GCGCACGCCT GATCGACAAC ATGGGAGTAG GCCCGCAATG A
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Protein sequence | MQTINRLDDL RQAVDSLKNG GKTLAFVPTM GALHEGHLTL VREAARRADH VVASIFVNPR QFGPNEDLDA YPRRMATDAA LLEAEGVALL WAPTVDQMYP DGYATNISVS GVSEVACGAA RPGHFDGVAT VVCKLFNQVR PDFALFGEKD WQQLAVIRRM ARDLDLTQPH VDRIIGVPTV REDSGLALSS RNQYLSDTER AQATGLSAAM RRAIAAIEGG AEVASSLAEL TREILAAGFV SVDYADLRDA ATLEEVVRFE GRPARLLVAA RIGGARLIDN MGVGPQ
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