Gene Saro_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3315 
Symbol 
ID3915962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3538648 
End bp3539553 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID640446100 
Producttransport-associated 
Protein accessionYP_498584 
Protein GI87201327 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACC GCAACGACTG GAACGGGAAC GATCGCTGGC GCGACGAGGA ACGTGGCGAC 
CACGGCAGGT CCGCGCATGG CTATCCGGGC TCGCGCTACA CCGGCTCGGG CTATCCGGGG
ACGACGTATG GCGGACCGGC TTCATCCTAC CGCGACGATC CGGACGGTTT CGAGCGCGAT
CAATGGGGCC GCTCGGGCAC ATCGGGGGCG GTGACGCCGC GCAACGATCC CAGATCGGGG
CGCAGCGGCA GCGAGATGCG CGGCGACAGG CGCACGCACG ACTGGGAAGT CGGCGACCGC
CACTATACCG GACAGGGCCG TCCGCAATGG CGCGACACGG CGGGTGGCTA TGGCGCAGCC
AGTTCGCCCG ACTGGTTCAC CGGCGAGGAC TACGGCGGCG GCACCCGCGC CTGGTCGGGT
TCGCGCCAGC CGGGCCTTTC CTACGGTCCG GGTGGATACC CTGCTTCCGC CGGGTACAGC
GGGCGCGGCA GCTACGGCTA TGACGACGGG CGCGGATTCA TGGACCGCGC GGTCGACGAA
GTGCGCAGCT GGTTCGGCGA TGACGAAGCT GCGCAGCGGC GCGAGGAGGA CCATCGCGGT
CGCGGCCCAA GCGACTACAC CCGCTCGGAC GAACGCATCC GCGAGGACGT GAACGACCGG
CTCACCGACA ATCCAAGGCT GGACGCCCGC AACGTCTCGG TCATGGTGAC CGAAGGCGAA
GTTACCCTCT CGGGTACGGT CGGCAACCGC GAGGACAAGC GCCGCGCGGA AGACTGCGCC
GACGCCGTCT CGGGCGTGAA GCACGTCCAG AACAACCTGC GGGTGCGCAG CGGAAGCAAC
CTCGAAGGCC AGGGCGGAAC GCTTGGCTGG GGCGGTGGCG ACAGCTCGGT GACGCCCACC
GCCTGA
 
Protein sequence
MNDRNDWNGN DRWRDEERGD HGRSAHGYPG SRYTGSGYPG TTYGGPASSY RDDPDGFERD 
QWGRSGTSGA VTPRNDPRSG RSGSEMRGDR RTHDWEVGDR HYTGQGRPQW RDTAGGYGAA
SSPDWFTGED YGGGTRAWSG SRQPGLSYGP GGYPASAGYS GRGSYGYDDG RGFMDRAVDE
VRSWFGDDEA AQRREEDHRG RGPSDYTRSD ERIREDVNDR LTDNPRLDAR NVSVMVTEGE
VTLSGTVGNR EDKRRAEDCA DAVSGVKHVQ NNLRVRSGSN LEGQGGTLGW GGGDSSVTPT
A