Gene Saro_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3308 
Symbol 
ID3915955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3527377 
End bp3528012 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID640446093 
ProductHNH endonuclease 
Protein accessionYP_498577 
Protein GI87201320 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.329837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCCACA AGGCGCTGAT CGAGCGGGCG GCTTCGGCCA GGCCCCACAG CGGCGATGAC 
GCCGCCGCCC ACCATGTGCT TCAGAACGAC CGGCACCTGT CCAATTGCCC GGCGCTGGTG 
CTGAACGCGG ATTACACGCC GCTCAGCTAC TATCCGCTCA GCCTCTGGCC GTGGCAGACG 
GCGATCAAGG CGGTCTTCCT CGAACGCGTT GACATCGTCT CGACTTACGA GCGCGAGGTC 
CACAGCCCCG GGTTCGGCAT GAAGCTGCCC TCGGTCATCG CGCTGCGCCA ATACGTCCGG 
CCGAGCGAGT ATCCCGCCTT TACCCGCTTC AACCTGTTCC TGCGTGATCG CTTCCAGTGC 
CAATATTGCG GCAGCCCCGA ACACCTGACT TTCGACCACA TCGTGCCGCG CCGGCTTGGC 
GGGCGCACTT CGTGGGAAAA TGTCGCGGCG GCCTGCGCGC CCTGCAACTT GCGCAAGGGT 
GGGCGCACTC CCGAACAGGC GAACATGCGG CTGATGAACC GCGCGATCCG GCCGACGACT 
TGGCAGTTGC AGGAACGGGG CCGGGCCTTC CCGCCCAACT ACCTGCACGA GACCTGGCGG 
GACTGGCTCT ATTGGGACGT CGAGCTGGAA AGCTAG
 
Protein sequence
MLHKALIERA ASARPHSGDD AAAHHVLQND RHLSNCPALV LNADYTPLSY YPLSLWPWQT 
AIKAVFLERV DIVSTYEREV HSPGFGMKLP SVIALRQYVR PSEYPAFTRF NLFLRDRFQC 
QYCGSPEHLT FDHIVPRRLG GRTSWENVAA ACAPCNLRKG GRTPEQANMR LMNRAIRPTT 
WQLQERGRAF PPNYLHETWR DWLYWDVELE S