Gene Saro_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3288 
Symbol 
ID3915935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3505741 
End bp3506793 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID640446073 
Productcytochrome oxidase assembly 
Protein accessionYP_498557 
Protein GI87201300 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCT CTCCTTCGCC TTCCACCCGT GCAGACGCGC TGGCCCTTGC GCGCTGGCTC 
TTCGTCGTTG CCTTCATGGT CGTCGCCATC GTTGCGGTGG GGGGGATAAC CCGCCTGACC
GAATCGGGCG TTTCGATCAC CGAATGGAAG CCCGTCGCGG GCACGCTCCC GCCGATCACC
GATGCCCAGT GGCAGGCGGA GTTCGATGCC TATCGCCAGA CGCCGCAATT CCAGCTGGTC
AACGGTCCGG CGGGCATGAC GCTGGCGACC TACAAGTTCA TCTTCTTCTG GGAGTGGGTC
CACCGTCTGC TCGCCCGCAC CATCGGCCTC GTCTTCGCGG CGCCGCTGGC GTGGTTCTGG
ATCAAGCGCC GCATCCCCGA AGGCTACAAG CCGCGCCTCG TCGCGCTGCT TGCGCTCGGC
GCGCTGCAGG GGGCAGTGGG CTGGTGGATG GTCAAGTCCG GCATCGTCAA CGACGTCAAG
GTCAGCCACT TCCGCCTCGC CACGCATCTC CTGGTTGCCC TGTTCACGCT CGGCGGCCTG
GTGTGGACCG CGCTCGATCT CGTCGCCCTG TCGAAGGGCG AGGCGCGTTC CAGGCTGCGC
GGCATCGGCC TGTTGGCGCT GGCCATGCTG GTGCTCCAGC TCTTCTACGG CGCGCTCGTC
GCAGGCTTGC GCGCCGGCAC TTCGGCCGGT GGTGGCTGGT TCAACTGGGA CGCCTGGCCG
TTGATGCAGG GCAGCCTCTA CCCCGATGGC GTGGACTGGG CGACGGGCGC CGTGCACGCG
CTGCTCTCGG ACGTGTTTCT AGTCCACTTC ATCCACCGCT GGTGGGCCTG GGCGGTGGTC
GCGGTCCTGG TGGTCGTCGC CCGCAAGCTG CGCAAGACAA ACCGCAAGGC CTCCATCGTG
CTCCATTCGG TGTTCGGTAC GCAGGTCCTG CTCGGCATCT TCACTGTGTG GAGCGGCGTG
GCGCTGTGGA TTGCGGTGTT GCACCAGTTC GTCGGCGCGC TGCTTGTCGC CGCGACGACG
TGGAGCGCGC ATCTGCTCGG CGCGCGCAGG TGA
 
Protein sequence
MSASPSPSTR ADALALARWL FVVAFMVVAI VAVGGITRLT ESGVSITEWK PVAGTLPPIT 
DAQWQAEFDA YRQTPQFQLV NGPAGMTLAT YKFIFFWEWV HRLLARTIGL VFAAPLAWFW
IKRRIPEGYK PRLVALLALG ALQGAVGWWM VKSGIVNDVK VSHFRLATHL LVALFTLGGL
VWTALDLVAL SKGEARSRLR GIGLLALAML VLQLFYGALV AGLRAGTSAG GGWFNWDAWP
LMQGSLYPDG VDWATGAVHA LLSDVFLVHF IHRWWAWAVV AVLVVVARKL RKTNRKASIV
LHSVFGTQVL LGIFTVWSGV ALWIAVLHQF VGALLVAATT WSAHLLGARR