| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3200 |
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| Symbol | |
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| ID | 3917458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3416729 |
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| End bp | 3418531 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640445984 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_498469 |
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| Protein GI | 87201212 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTCA TCGATCCCGT TTCCGACAGT TCCGCCGTCC TCGACCGCCT CCACGAAGTG
TTCGGCTTCA CCACCTTCCG CGGGGTGCAG CGGGACGTGG TGGAGCGCGT GCTGGCGGGG
CGCTCGACGC TTGCGGTCAT GCCGACGGGC GCGGGCAAGT CGCTCACCTA CCAGCTCCCC
GCCGTCATGC TCCCGGGGAC TTGCGTGGTC GTATCGCCGC TTATCGCGCT GATGCACGAC
CAACTCCGCA GCGCCACCGC CAACGGCATT CGTGCCGCGA CCCTGACCAG CGTCGACCTG
GATCGCGGGC AGACCATCGA CCGCTTCCTG GCGGGCGACC TCGACCTGCT CTACGTCGCT
CCCGAACGCG CCAGCCAGCC GCATTTCATG GAAATGCTGA GCCGGGGGCG CGTGGCGATG
TTCGCGATCG ACGAGGCCCA TTGCGTTTCC GAATGGGGCC ATGATTTCCG CCCCGACTAT
CGCCTCCTGC GCCCCCTGAT GGACGCCTTC CCGGATGTCC CCCGGCTTGC CCTGACTGCC
ACGGCCGACC GCCACACCCG CGCCGATATC CTCGCGCAGC TAGGCATCCC GGAAGAAGGG
CTGATCGTCG CCGGGTTCGA CCGGCCCAAC ATCCGTTATG GCATCGTCCC GCGCGACAAT
CCGCTGCGGC AGCTGATGAC GGTGATTGCC GAGAATCCCG GCCCCGGCAT CGTCTATGCC
CCCACCCGCG CGCAGGTGGA GAAGCTGAGC CAGCAGCTGG GTGCGAGCGG CCGGCCCGTG
CTGCCCTACC ACGCCGGCCT TGATCCGCAG GTGCGGGCTG CCAATCAGGC CGCCTTCGTC
GCGTCGGAAG ACATGGTCAT GGTCGCCACG GTCGCGTTCG GCATGGGCAT AGACAAGCCC
GACGTGCGCT TCGTCGCCCA CGCGGCCTGC CCCAAGTCGA TCGAGAGCTA TTACCAGGAA
ACGGGCCGCG CAGGGCGCGA CGGCGACCCG TCTGTCGCGG TCATGCTTTG GGGCGCCGAA
GACTTCGTGC GTGCCCGTCA GAGACTTGCC GAGGTCGAGG AGCACCGCCG CGCGGGCGAG
CGCACCCGCA TCGATGCGCT GGCATCGCTC GTGGAAACGC CGCATTGCCG CCGTGCGCTG
CTCCTTCGCC ACTTCGGCGA AACCCCCCCG CCGTCGTGCG GCAACTGCGA CAACTGCCTC
GAAGCGCCCC GGGTGACCGA CGCGACCGAG ACCGCGCGCA AGCTCCTGTC GGCCGTCTAT
CGCACCGGCC AGTCATTCGG CTTCGGATAT CTCGAGAAGG TGCTGACCGG CGTTGCCGAC
GAGCGCGTGA TCCAACGTGG TCACGATCAG CTTTCGGTTT TCGGCATCGT GACCTCCGAC
GAAGCCCCGT TGCTGCGCCC GCTGGCGAGG GCCTTGCAAG CGCGCGGCGC GCTCGTGGCG
ACCGAGCACG GCGGGCTGGC ACTGGGCGGC GAGGCTCGGG CGATCCTCAA GGGCGAGGCG
GAAGTGCCGC TGGTGCTGGT GCCGAAGAAG GAGGGCCGGG GGAGCAGGCG CGGGCGGAGC
GGGGCAGGGG CCGCGCTCAA CCCCGTGGGC GATCCGCTGT TCGACGCCCT GCGCGCCTTG
CGTCGCGACC TGGCGCGCGA AGCCGGTGTC CCGCCCTATG TCATATTCCA CGATTCTGTC
CTGCGCGAAT TGGCGGCGTC CCGGCCCGCC ACGCTTGCCG ACATGGGCCA GATCGGCGGC
GTCGGCACCC GCAAGCTCGA CGCCTACGGC GACCGTTTCC TTGAAGAGAT CCGGCAGTGG
TAG
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| Protein sequence | MSLIDPVSDS SAVLDRLHEV FGFTTFRGVQ RDVVERVLAG RSTLAVMPTG AGKSLTYQLP
AVMLPGTCVV VSPLIALMHD QLRSATANGI RAATLTSVDL DRGQTIDRFL AGDLDLLYVA
PERASQPHFM EMLSRGRVAM FAIDEAHCVS EWGHDFRPDY RLLRPLMDAF PDVPRLALTA
TADRHTRADI LAQLGIPEEG LIVAGFDRPN IRYGIVPRDN PLRQLMTVIA ENPGPGIVYA
PTRAQVEKLS QQLGASGRPV LPYHAGLDPQ VRAANQAAFV ASEDMVMVAT VAFGMGIDKP
DVRFVAHAAC PKSIESYYQE TGRAGRDGDP SVAVMLWGAE DFVRARQRLA EVEEHRRAGE
RTRIDALASL VETPHCRRAL LLRHFGETPP PSCGNCDNCL EAPRVTDATE TARKLLSAVY
RTGQSFGFGY LEKVLTGVAD ERVIQRGHDQ LSVFGIVTSD EAPLLRPLAR ALQARGALVA
TEHGGLALGG EARAILKGEA EVPLVLVPKK EGRGSRRGRS GAGAALNPVG DPLFDALRAL
RRDLAREAGV PPYVIFHDSV LRELAASRPA TLADMGQIGG VGTRKLDAYG DRFLEEIRQW
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