Gene Saro_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3165 
Symbol 
ID3918207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3379785 
End bp3380327 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID640445949 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_498434 
Protein GI87201177 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.575063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATA AAGAGCTGGA AAGACGGGAT TTTATTGGAA CTCTTGGGGC GCTTCTCGGC 
CTCGCGACGC TCCCCGCCAG CGCTCTTGCG GCGAGTCAGC AGGCGTCGAT CCCGGCTTCG
CAGGTGGCGC TCGTCGCTGC GGTGGCGGAC ACGATGATTC CCAGGACCGA CACTCCCGGC
GCGGTCGATG TCGGGGTGCC GAAGCTGCTG TCGGCCCTGC TCGCCAACTG GGCCGCGCCG
GCCACCCGCA CCGCGCTCCT CGGGCAGTTC GATGCCATCG ACGTGGCTGC GCGCGGGGCC
AAGGGCAAGC CCTTTGCGGC GCTGAAGCCG GCTGATCGGC TTGCCGTGCT GAAGGCCTAT
GACGCGGCCA GTTTCACCCA GGCGGACTAC AAGCGCCTGC GCGGCCTGAT CCTGATCCTC
TATTACAACT CCGAACCGGG TGCGACCGTG GAACTGCGCT ACGAACACGC GCCTGGCGCC
TACGAGCCCT CCCTGCCGAT CACGCCGCAG ACCCGCGCGT GGGCTGGCAT GTCGTTCTTC
TGA
 
Protein sequence
MFHKELERRD FIGTLGALLG LATLPASALA ASQQASIPAS QVALVAAVAD TMIPRTDTPG 
AVDVGVPKLL SALLANWAAP ATRTALLGQF DAIDVAARGA KGKPFAALKP ADRLAVLKAY
DAASFTQADY KRLRGLILIL YYNSEPGATV ELRYEHAPGA YEPSLPITPQ TRAWAGMSFF