Gene Saro_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3150 
Symbol 
ID3918192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3361673 
End bp3362998 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content67% 
IMG OID640445934 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_498419 
Protein GI87201162 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTAC AGTTCCCGTC GATCAACGCC GCTCCGCTGA AGGGCCTCGA CCCGCTGGTC 
TGCGCGACCA CCCGCGTCAC CGTGCTAGGT CTCGGCTATG TCGGCCTGCC GCTGGCCGTA
GCGCTGGCCA AGCGATTCTT CGTCACCGGC TTCGACATCG ACGTCGAACG CATTTCCGAG
CTGTCCGAAG GCCACGACCG CACCCGCGAG ATCGAACCCG CGCTGCTGTC GATGTCGAGC
CTGGGCCTTA CCTGCGATGC CGGGGTCTGT CCGCCAAGCG ATTTCTACAT CGTCACCGTG
CCCACCCCTA TCGACGCCGC CAACCGCCCC AACCTGCGCC TGGTCGAGGC CGCTTCGCGC
ACGGTCGGCC AGATGCTTCC CCGGGCCGTG GCCGAAGGCC GCCAGCCCAT CGTCGTCTAC
GAAAGCACCG TCTATCCCGG CGTCACCGAG GACATCTGCG GCCCGATCCT CGAGCAGGTC
TCCGGCCTCA GGTGCGGCAC GGACTTCTTC CTCGGCTACA GCCCGGAACG CATCAACCCG
GGCGACCGCG AACACACCAT CGAGCGGATA ACCAAGGTCG TCTCGGGCCA GACACCCGAA
GTGCTCGACC GCGTGGCCGA CCTCTATGGC GCGATCACTT CGGGCGGCGT CTTCCGCGCC
GCCTCGATCA AGGCCGCCGA GGCCGCCAAG GTCATCGAGA ACGCCCAGCG CGACATCAAC
ATCGCCTTCA TGAACGAGAT CACGCAAATC TTCTCGCGCA TGGACCTTTC GGTCTGGGAC
GTGCTCGCGG CGGCGGGCAC CAAATGGAAC TTCCTGCCCT TCACCCCCGG CCTCGTCGGC
GGACACTGCA TCGGCGTCGA TCCCTACTAC CTCTCCGCGC GCGCCGAAGC GCTGGGCCAT
GACCCGCAGG TGATCCTCGC CGGTCGCGGC GTGAACGACG GCATGGCGAA ATGGGTCGCG
GGCGAGCTTC ACGCGCGGCG CGGCGGCAAG CCCGGCTCGG TCCTCGTGCT GGGCCTGACG
TTCAAGGAAA ACGTGCCCGA CCTGCGCAAT TCCAAGGTGG CCGACGTCAT CGCCGAACTG
AAGGCCCTGG GCCATGCGGT CGACGTGCAC GATCCCCACG CCGATACCGC CGAGGCTCTG
CTCGAATATG GCCTCGAACT CGCCGGCGAC GCGTTCGAGC AGACCTACGA TCTCGTGTTC
CTCGCCGTGC CGCACAAGTA CTACCTGGCA GCAGGCGCGG ACCGTATCGC TGCGCTCGTC
GCGCCCGGCG GCACGCTGGC CGATCTCAAG GGCGTCCTGG GCGAGGCCGC CGACTGGCGT
CTCTGA
 
Protein sequence
MTVQFPSINA APLKGLDPLV CATTRVTVLG LGYVGLPLAV ALAKRFFVTG FDIDVERISE 
LSEGHDRTRE IEPALLSMSS LGLTCDAGVC PPSDFYIVTV PTPIDAANRP NLRLVEAASR
TVGQMLPRAV AEGRQPIVVY ESTVYPGVTE DICGPILEQV SGLRCGTDFF LGYSPERINP
GDREHTIERI TKVVSGQTPE VLDRVADLYG AITSGGVFRA ASIKAAEAAK VIENAQRDIN
IAFMNEITQI FSRMDLSVWD VLAAAGTKWN FLPFTPGLVG GHCIGVDPYY LSARAEALGH
DPQVILAGRG VNDGMAKWVA GELHARRGGK PGSVLVLGLT FKENVPDLRN SKVADVIAEL
KALGHAVDVH DPHADTAEAL LEYGLELAGD AFEQTYDLVF LAVPHKYYLA AGADRIAALV
APGGTLADLK GVLGEAADWR L