Gene Saro_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3125 
Symbol 
ID3918167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3336959 
End bp3337366 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content64% 
IMG OID640445909 
ProductPhage major tail protein, TP901-1 
Protein accessionYP_498394 
Protein GI87201137 
COG category[S] Function unknown 
COG ID[COG5437] Predicted secreted protein 
TIGRFAM ID[TIGR02126] phage major tail protein, TP901-1 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCC AGAAGGGAAG CGCATTCCTG CTGAAGATCA GCGATGGCGC AGCGACGCCC 
ACCTACAACA CCGTAGCGGG ACTTCGCACC ACGCAGATGT CGATCAATGG CGAGGCCGTG
GTCATCACCA GCAAGGATTC GGGCGGATGG CGCGAGCTGC TGTCCGGGGC CGGCACGCGT
TCGGTGACGG TGAGCGCGGC AGGCATCTTC CTGGGAAGTG CCGCCGAAGC GCAGGTACGC
GCCAATGCGC TGGGCGGGAC GATCGCGGAC TACGAACTGT CGTTCGAGGG CGGCGAGAAG
ATGCGCGGCA AGTTCCTTGT CCAGCGGCTC GACTACTCCG GCGATTTCAA CGGCGAGCGC
AACTACACCA TGACGCTCGA AAGCTCTGGC GTGGTGGCAC AGGCATGA
 
Protein sequence
MAAQKGSAFL LKISDGAATP TYNTVAGLRT TQMSINGEAV VITSKDSGGW RELLSGAGTR 
SVTVSAAGIF LGSAAEAQVR ANALGGTIAD YELSFEGGEK MRGKFLVQRL DYSGDFNGER
NYTMTLESSG VVAQA