Gene Saro_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3116 
Symbol 
ID3918158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp3329801 
End bp3330448 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID640445900 
Producthypothetical protein 
Protein accessionYP_498385 
Protein GI87201128 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCC GCCTTTACGA ATGGACAATG GCCAAGGCCG GGCACCCCCA CGCCGAATGG 
TGGCTCGCGC TCTTCGCGTT CATGGAAGCA AGCTTCTTTC CGATCCCGCC GCATCCTCTG 
CTCGGCCTCA TGTGCCTGGC CGAACCGCGC AAGGCGGTGC GCTTCGCCGC GATCGCGACC 
GTGGCCTCGG TCCTCGGCGG CCTGCTCGGC TACGCCATCG GCTACGGGCT CTACGATACC 
GTGGGTACGC AACTCCTCGC CGCGCTCGGC CTTTCCGAAA GCTTCCCCAA GGCCGCCTGC 
TACCTGCGCG AGTACGGGGC CGAGATCATC ATGATCAAGG GCGCGACACC CATTCCGTTC 
AAGCTGCTGA CGATCACCGC CGGCTTCATC GCGATGCCGC TGGTGCCGTT CATCCTGGCG 
AGCATCGTCT CACGCTCGAT CAGCTTCATG ATCGTCGGCG TTCTGTTCCG CCTGTTCGGC 
GCCCCGATCA AGCGCTTCAT CGACAAGTAT CTCGGACTCG TCACGGTTGG CTTCGTGGTA 
CTCGTCGTCG GCGGCTTCGT TGCTGCCACG ATGCTGGGCG GCGGCGGCAC GTCGGAAACG 
AAGGCCATTT GCGAACAGGC CACGCCAGCC GCTTCCGCCA CCGCCTAG
 
Protein sequence
MLRRLYEWTM AKAGHPHAEW WLALFAFMEA SFFPIPPHPL LGLMCLAEPR KAVRFAAIAT 
VASVLGGLLG YAIGYGLYDT VGTQLLAALG LSESFPKAAC YLREYGAEII MIKGATPIPF 
KLLTITAGFI AMPLVPFILA SIVSRSISFM IVGVLFRLFG APIKRFIDKY LGLVTVGFVV 
LVVGGFVAAT MLGGGGTSET KAICEQATPA ASATA