Gene Saro_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3115 
Symbol 
ID3918157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3328925 
End bp3329791 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID640445899 
ProductMltA-interacting MipA 
Protein accessionYP_498384 
Protein GI87201127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTGT CCAAGGCCGC CGCCCTATCC GCATGCATGC TGGCCCTGGC CGCGCCCGCG 
ATGGGCCAGT CGGCTCCCGG CCAGGCTGCT CCCGGCCAGA CCGCTCAGCC CGGACGCCCG
CCCACGCAGC CGCAGGGCTG GTCGATGACG GTCGGCCTGG CCCCGGTCTA CGGCATGGCT
TGGCAGGGAT CGAAGGACAC CGCGCTATCG ATTTTTCCCG ACCTGCGGGT GAACTACAAG
GACGCGCTGT TCCTCTCGGT GCCGGAGGGG CTGGGCTGGA ACGCGGTCAA TGCCAACGGG
TGGAAGGCCG GGCCGCTGCT GAAGGCGCGT TTCGGGCGCA ACGAGGACGA TGGCGGATCG
CCGTTCCAGA TCGCGGGTGG CAGCGATGCG CTACGCGGCA TGGGCGACAT CGGCATTGCC
GGCGAGGCGG GCGCCTTCGT TGAAAAGCGC TTCGGCACAC GGCAGCAGTG GCGGGCGCGG
GCCGAAGTGC GGCAGGGGTT CGGCGGGCAC GAGGGCATAG TGGGCGACAT ATCGCTGAAC
TGGTCGGGCA GGACCGGGCG CACGATCCTT TCGGCAGGAC CGCGCGCGAC CTTTGCCAGC
CGCGAATACA TGCAAACCTA TTTCGGCGTC GATGCCGTGC AGGCGAGCCG TACCGGACTG
GCCGCGTCGC GCCTGGGTGG CGGGCTCGTG TCCTATGGAC TGGGCGCGAG CATCGTCCAA
CCGCTCGACC GGCGCCGGGC CGTCACGGTC TTTGGCGGGG CGGACCGGCT GGGTGGCGAA
CCTGCGGGAA GCTCGCTGAT ACGCGAGCGG GGACAGCGCA CCCAGTTCGT GGTGGGCGTG
GGCTACGGGT TCCGCTTCGG GCTCTAG
 
Protein sequence
MRLSKAAALS ACMLALAAPA MGQSAPGQAA PGQTAQPGRP PTQPQGWSMT VGLAPVYGMA 
WQGSKDTALS IFPDLRVNYK DALFLSVPEG LGWNAVNANG WKAGPLLKAR FGRNEDDGGS
PFQIAGGSDA LRGMGDIGIA GEAGAFVEKR FGTRQQWRAR AEVRQGFGGH EGIVGDISLN
WSGRTGRTIL SAGPRATFAS REYMQTYFGV DAVQASRTGL AASRLGGGLV SYGLGASIVQ
PLDRRRAVTV FGGADRLGGE PAGSSLIRER GQRTQFVVGV GYGFRFGL