Gene Saro_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3090 
Symbol 
ID3916705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3311225 
End bp3311611 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content61% 
IMG OID640445873 
Productendoribonuclease L-PSP 
Protein accessionYP_498359 
Protein GI87201102 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACA CCGAAACCTC TGACAGCTTC GGGTACTGCG CGGCACGCGC TGCCGGCGGC 
CTGTTGTTCT GCTCAGGGCA GATCGGTTTG GAAGCCGATG GCAGCGTTCC CGAAGCGGCG
TCGCGCCAGT TCGACATGGC ATTCGCAGCT CTGGCCGAAA CGCTGGAGCA GAATGGCTGT
GCAACGTCCG ACATCGTTGA CCTGACGAGC TTCCACGTTG GCTATCCCGC ACACATGGAA
GAATTCGCGA AGGCAAAGGC GGCCTTCCTC GACGGCGCGA CCTGTTGCTG GACGGCAATC
GGGGTAGCCA GCCTAGGCTA TCCCGGCTCT CTGGTAGAGA TCAAGGCAGT CGCCACACGA
CCTGTAGCAA CAAGTCAGAA CGCATGA
 
Protein sequence
MLDTETSDSF GYCAARAAGG LLFCSGQIGL EADGSVPEAA SRQFDMAFAA LAETLEQNGC 
ATSDIVDLTS FHVGYPAHME EFAKAKAAFL DGATCCWTAI GVASLGYPGS LVEIKAVATR
PVATSQNA