Gene Saro_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3085 
Symbol 
ID3916700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3305260 
End bp3305907 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID640445868 
ProductTetR family transcriptional regulator 
Protein accessionYP_498354 
Protein GI87201097 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCAACG CCTCAAGACC CGTAGCGCGC CAGCCCCGTG GCGATGCGAC GCGCCACGCC 
ATCCTGACGG CGGCCGAGAC TGTGTTCGCC GACCTGGGCT ACGCCGCAGC ACGGCTTGAG 
GACGTGGCGC AGGTGGTGGG CATCCGCAGG CCCTCGATCG TCTACTACTT CCCGGGCAAG 
CGGCAGCTTT ACGACGAAGT GGAAGCCGAC ATCTTTGCGG CGATGCACGC CTTCGTGGTG 
GAGCGCATGG CGGAAGCTTC GCGGCCGATC GACCGGCTAC TCGCCATTCT CGATGCCTGG 
CTGGACTTCT TCGTCCAGCG ACCCACGGCC GCGCGGATCA TCCAGAGGCT TGTCGCCGAC 
CCCGGCCCGC GCAGCGAGGA CCCGGTGGAA TTTTCCGGCA CCGCACTCGC GGATTTCGAA 
GCCATCATCG CCTCGGGCGT GGCCGACGGC AGCTTCCGCG AAGTGCCCGC CATGCACATC 
CTCAACAGCG TTGCCGCCGG CGCACTGTTT TATGTCTGCA ACGCCCGCCA GCTCGGCGCG 
GGCCGGGAAT ATGACCCCGC AGACCCGGCC ATCCTCGCCC AGTTCCGCGC TACCCTGCAC 
CGCCAGGCCA TCGCCGCGGT CGGCCACGCG GACCAGCCCC AGGGCTGA
 
Protein sequence
MSNASRPVAR QPRGDATRHA ILTAAETVFA DLGYAAARLE DVAQVVGIRR PSIVYYFPGK 
RQLYDEVEAD IFAAMHAFVV ERMAEASRPI DRLLAILDAW LDFFVQRPTA ARIIQRLVAD 
PGPRSEDPVE FSGTALADFE AIIASGVADG SFREVPAMHI LNSVAAGALF YVCNARQLGA 
GREYDPADPA ILAQFRATLH RQAIAAVGHA DQPQG