| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3063 |
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| Symbol | |
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| ID | 3916677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3282003 |
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| End bp | 3283325 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640445845 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_498332 |
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| Protein GI | 87201075 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC AGTTCCCTGC CTTCGTCCCT AGCCGCACCG CCCGGCTGAT CGTCTCGACC
GCGCTTGCCG CAGGTGTCCT CACCGGGTGT GCCGCCGGGG GGGCGCGTCC GGACAAGTTC
GCGTCGTCCG CGCGGACCGC GCTTGCCAAG GGCAGCGCGA GCGGCGCCAT CGGCAACGCA
GAAAAGGCCG TGCTCGCCGA TCCGCGCAAT CCGGCCTACC GTGTCCTGCT CGGCAATGCC
TACCTCAAGG CCGGACGCTT CGAATCGGCG CGGCAGGCCT ATGACGAGGC GATGGACCTC
GGCGAGGATT CCAGCCGCAC CGCGCTGAGC CTCGCGCTGG CGGACATCGC GCTTGGTCGC
AATGCCGAGG CGATCGACAC GCTGAACTCC TATCGCGAAA GCATCGCCGC TTCCGACTAC
GGTCTCGCCC TCGCGCTTGC CGGGCAGCCG GCGCAAGGCG TGTCGGTCCT GTCCGAGGCG
CTGCGTGGTG GCGAAAACAC CGCCAAGGTC CGCCAGAACC TGGCCCTGGC CTATGCGCTC
GCAGGGCGCT GGCGCGAAGC GCGGACCATG GCCGCGCAGG ATGTGCCCGC AGACCAGCTT
GGCGACCGCA TGGAACAGTG GGCCGTGATG GGGCAGCCAG AGCGCACCCG CGAACGCGTT
GCCGGCCTGC TCGAGGTGCC CCTGCGGGGC GACTCCGGCC AGCCCGCCGC ACTGGCGCTT
GCCAATTTCC CGGCCGTCGA GCAACTCGCG GCCGAGGCCG CGACGCGCGC CGAGCCTGCT
GACCAGCCTG CCGCCGCCGC AGCCCCCGCG CTTGCCGAAG CGTCGGTCCG CGAATTGCCG
CCGGTCGAGC CGTCGGTAAC GCCGGAACCT GCCGTCGCCG ATTCCTCGTC GCAGCCCAGG
CAGGCGCAGC TCGCCCTGAT CGACGTGCCG CCTTCGCGCT CGAACCCGGT CGCGCCGCGC
GTTCACCTGG CCGTACCCAC CAAGGTCGCC ACCACGCCCA AGGCTGCCGC TCCCGCACCA
AGGGGGACGC ATCTCGTCCA GCTCGGCTCC TTCTCCAGCG CCGAAGGCGC GCGCCGTGCA
TGGCGCCACT TCACCACGCG CAATCCGGAG CTGCGCGGCT ATGGCAACGT CACGACCCAG
GTCACGGTGG GCGGGCGCCA GTTCTGGCGC GTTCAGGCTG CCGGATTTGC GGGCTATGGC
TCGGCGAGTT CGATGTGCGG CGCAGTCCGC TCGCGCGGCG GGGCGTGCAT GGTCCTTCGC
GGCGCCGCAC CTGCGCTGCC TGGGCAGCAG CGCGCCGCTG AAACGCGCAT GGCCAAGCGC
TAG
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| Protein sequence | MTIQFPAFVP SRTARLIVST ALAAGVLTGC AAGGARPDKF ASSARTALAK GSASGAIGNA
EKAVLADPRN PAYRVLLGNA YLKAGRFESA RQAYDEAMDL GEDSSRTALS LALADIALGR
NAEAIDTLNS YRESIAASDY GLALALAGQP AQGVSVLSEA LRGGENTAKV RQNLALAYAL
AGRWREARTM AAQDVPADQL GDRMEQWAVM GQPERTRERV AGLLEVPLRG DSGQPAALAL
ANFPAVEQLA AEAATRAEPA DQPAAAAAPA LAEASVRELP PVEPSVTPEP AVADSSSQPR
QAQLALIDVP PSRSNPVAPR VHLAVPTKVA TTPKAAAPAP RGTHLVQLGS FSSAEGARRA
WRHFTTRNPE LRGYGNVTTQ VTVGGRQFWR VQAAGFAGYG SASSMCGAVR SRGGACMVLR
GAAPALPGQQ RAAETRMAKR
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