| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2936 |
|---|
| Symbol | |
|---|
| ID | 3917371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3151939 |
|---|
| End bp | 3153396 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640445714 |
|---|
| Product | succinate semialdehyde dehydrogenase |
|---|
| Protein accession | YP_498205 |
|---|
| Protein GI | 87200948 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.890492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGC AACTCAACGA TCCGTCGCTC CTGCGGCAGG CCGCGCTGAT CGACGGCGCA
TGGATTTCCG GCGATCTGCC CAAGGTCGAA GTCCTCGATC CGGCAAGCGG CGAGGTCGTC
GGCGTGGTCC CGGATTGCGG CGTAGCGGAG ACCGAGGCCG CCATTGCCGC GGCCGAGGCA
TCCTGGGCCG GCTGGCGCCG CCGCACGGCG AACGAGCGCG CCGCCCTGCT TGAAGCGTGG
CACGCGCTGG TCCTTGCCAA CCTCGACGAT CTCGCCCGCA TCATGACGGC CGAGCAAGGC
AAGCCCCTGG CCGAATCCCA AGGCGAAATC CGGTACGCCG CGACCTTCAT CAAGTGGTTT
GCCGAAGAGG GGCGCCGCGT CGGCGGACGC AACATTCCCT CGCCCGAGCG AGATCGCCGC
ATCATCGTGA TGACCGAGCC GGTCGGTGTG TCCGCTGCGA TTACCCCGTG GAACTTCCCG
GCGGCCATGA TCACGCGCAA GTGCGCGCCG GCGCTCGCTG CCGGCTGCCC GGTTGTCATC
AAGCCCTCGG AAATGACCCC GTTCACCGCG CTTGCGCTGG TCGAACTGGC TTTGCGCGCG
GGCTTTCCCA AGGGGACGAT CAACCTGGTC ACCGGCATGC CGCAGGCGAT TGGCGCGGCC
ATCACCGCCA GCCCGGTCGT GCGCAAGCTG TCCTTCACCG GTTCCACCCG CGTCGGTGCG
CTGCTGATGC GGCAGAGCGC GGACACGATC AAGCGGCTCA GCCTCGAACT GGGCGGCAAT
GCCCCGCTGA TCGTGTTCGA CGATGCCGAT CTCGACCTCG CGGTGAAGGC CGCGATGGCC
TCCAAGTTCC GCAACGCCGG CCAGACCTGC GTCTGCGCGA ACCGTATCCT CGTCCATGCT
CCCGTCTACG AGGAGTTCGC CTCGCGTCTC GGCGCGGCCG TCTCGGCGCT CAACTCAGCA
CCGGGCATGG AAGCGGCTTC CACCGTGGGC CCGCTGATCA ATGCAGCGGC GGTCGAGAAG
GTCTCGGCCC ACGTCGAGGA TGCACTGGCG AAAGGTGGCA AGGTGCTGTT CTCGGGCAAG
GGACGGGAGG GCGGCAACTT CCTGCGCCCG CTCGTCATCG GCAACGCCAG CTCGGACATG
CGCCTCGCCA GCGAGGAAAC CTTCGGCCCG GTCGCCCCGC TCTTCCGGTT CGAGACCGAG
GATGAGGCGA TCGCTCTCGC CAACGACACG CCCTACGGTC TCGCCAGCTA TTTCTACACC
TCGGGCCTCG ACCGCGCCTT CCGCGTCGCC GAAGCGCTCG AGGCGGGCAT GATCGCGCTC
AATACCGGCT CGATCGCGAT GGAAATGGCC CCGTTCGGCG GCATCAAGCA GTCCGGCCTC
GGCCGCGAGG GTGGCCTTGC CGGCATCGAG GAATACCTTG AAACCAAGGC CTTCCACATC
GGCGGCCTTA AGATCTGA
|
|---|
| Protein sequence | MALQLNDPSL LRQAALIDGA WISGDLPKVE VLDPASGEVV GVVPDCGVAE TEAAIAAAEA
SWAGWRRRTA NERAALLEAW HALVLANLDD LARIMTAEQG KPLAESQGEI RYAATFIKWF
AEEGRRVGGR NIPSPERDRR IIVMTEPVGV SAAITPWNFP AAMITRKCAP ALAAGCPVVI
KPSEMTPFTA LALVELALRA GFPKGTINLV TGMPQAIGAA ITASPVVRKL SFTGSTRVGA
LLMRQSADTI KRLSLELGGN APLIVFDDAD LDLAVKAAMA SKFRNAGQTC VCANRILVHA
PVYEEFASRL GAAVSALNSA PGMEAASTVG PLINAAAVEK VSAHVEDALA KGGKVLFSGK
GREGGNFLRP LVIGNASSDM RLASEETFGP VAPLFRFETE DEAIALANDT PYGLASYFYT
SGLDRAFRVA EALEAGMIAL NTGSIAMEMA PFGGIKQSGL GREGGLAGIE EYLETKAFHI
GGLKI
|
|---|
| |