| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2892 |
|---|
| Symbol | |
|---|
| ID | 3915531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3111968 |
|---|
| End bp | 3113083 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640445671 |
|---|
| Product | putative NADH oxidoreductase |
|---|
| Protein accession | YP_498162 |
|---|
| Protein GI | 87200905 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC TTCGCGGCCA GCGCATCGTG TCCCAGCTCG ATGCCGACGG CACCCTCGCC
GTCTCGCTCC AGGACTTCGA CGTGCCCGAA CCCACCGGCA GCGAGGTCTT GATCCGGGTC
GAAGCGACGC CGATCAACCC CTCGGACCTC GGCCTTCTGT TCGGCCCGGC CGATGTGGTC
GGTGCGGAGT TTTCACCCGG TCGCGTTGTC GCCCGGATGC CCGAGCCGGC GGTGCGCGCC
ATGTCGGCGC GCCATGGCAT GGCGATGCCG GTCGGCAACG AGGGCGCCGG CACGGTGATC
GCGGCGGGCG AGGCGCCAGA GGCGCAGGCC CTGCTCGGCA AGCGCGTGAC CTGCTTCCCG
GGCGGCATGT ACGCGACCCA TGCAATTGCC GATGCGCGCA TGTGCCTTGA ACTGGCCGGC
GGCATCACGG CCGAGCAGGG CGCTTCGACC TTCGTCAACC CGCTGACGGC GCTGAGCTTT
ACCGAAACGA TGCGCTATCA TGGTCACTCG GCCTTGGTGC ACACGGCGGC GGCATCGAAC
CTCGGCCAGA TGCTCGTGAG GATCTGCCAC GCCGATGGCA TTCCGCTGGT CAACGTCGTG
CGCAACGAGG CGCAGGTGGC GATCCTCAAG GGCATCGGCG CCGAACATGT GGTGGATAGC
TCGAAGGATA CGTTCCTCGA CGATCTCGCC GCCGCGCTGG ATGCGACGAA GGCGACCATG
GCATTCGATG CGATCGGGGG CGGCAAGCTC GTCAGCCAGA TCCTGACCAC GATGGAGCAG
GTCGCGAACA AGGGCGCGGC CTATAGTCGC TACGGTTCGA ACAGCCCGAA GCATGCTTTC
ATCTATGGCG CGCTCGACCT GTCGCCGACG ATCCTGACGC GCAACTTCGG TTTCGTCTGG
GACGTTTCGG GCTGGCTGCT GACGCCCTGG ATGAGCAAGC TCGGGCCGGA GATCGTCGAC
AAGATGCGCC GCCGCGTCAT GGCCGAACTG ACCACGACCT TCGCAAGCCG CTACAAGGCG
CGCGTCACGC TGGAACAGGC CCTGACCCGC GACGCGGCTT TGGACTACAA CGCGCGGCGC
ACCGGCGAGA AGTACCTGAT CACGCCCAAC GGCTGA
|
|---|
| Protein sequence | MTQLRGQRIV SQLDADGTLA VSLQDFDVPE PTGSEVLIRV EATPINPSDL GLLFGPADVV
GAEFSPGRVV ARMPEPAVRA MSARHGMAMP VGNEGAGTVI AAGEAPEAQA LLGKRVTCFP
GGMYATHAIA DARMCLELAG GITAEQGAST FVNPLTALSF TETMRYHGHS ALVHTAAASN
LGQMLVRICH ADGIPLVNVV RNEAQVAILK GIGAEHVVDS SKDTFLDDLA AALDATKATM
AFDAIGGGKL VSQILTTMEQ VANKGAAYSR YGSNSPKHAF IYGALDLSPT ILTRNFGFVW
DVSGWLLTPW MSKLGPEIVD KMRRRVMAEL TTTFASRYKA RVTLEQALTR DAALDYNARR
TGEKYLITPN G
|
|---|
| |