Gene Saro_2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2662 
Symbol 
ID3918436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp2899661 
End bp2900770 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID640445439 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_497932 
Protein GI87200675 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.789856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGTCGC GCCGGAAGAA GACGCCGGAA AAGACGGACG AAGGGGTTTC CATGAAGATT 
GCGGTTCTGC CGGGCGACGG CATCGGTCCC GAAGTGACGC GCGAAGCGGT GCGCGTGATC 
GAGGCACTTG GCCTTGGCGA CATCGAGATG AAGGAAGCCC CGGTCGGCGG CGCGGCCTAC 
AAGGCCTATG GCCACCCGCT GCCGCCCGAG ACACTGGAGA TCGCGCGTCT TTCCGACGGC 
ATCCTGTTCG GCGCGGTGGG CGACCCCGAC TGCGACTCGC TTGAACGCCA CCTGCGCCCG 
GAACAGGCGA TCCTCGGCCT GCGCAAGGCG CTGACGCTGT TCGCCAACCT GCGCCCCGCG 
CGGGTGTTCA AGGGCATGGA AGACTTTTCC GCCCTGCGCC CCGAAGTGGC CGGCGCGATC 
GACCTGCTGA TCGTGCGCGA ACTGAACGGT GACGTGTACT TCGGAGAAAA GGGCTTCCGC 
ACCGCCGCCA ACGGCGACCG CGAAGGCTAC GACGTCATGT CCTACAGCGA GAGCGAAGTG 
CGCCGCATTG CCCACGTCGC GTTCCGCGCC GCGATGGGCC GCAAGAAGCG CCTGTGCTCG 
GTCGACAAGG CCAACGTCCT CGAGACCAGC CAGCTCTGGC GCGACGTGAT GCTCGAAGTG 
GCGAAAGACT ATCCCGAAGT CGCGCTCGAG CACATGTACG TCGACAACGC CGCGATGCAG 
CTCGTCCGCG CTCCCGGCAA CTTCGACGTC GTCGTTACCG GCAACCTGTT CGGCGACATC 
CTTTCGGACC AGGCATCGAT GTGCGTCGGC TCGATCGGGC TCCTGGCCTC GGCCTCGCTC 
GGCGAACGCG AGACCGAATA CGGCACGTTC GGCCTGTACG AGCCGATCCA CGGCTCGGCT 
CCCGACATCG CGGGCAAGGG CCTTGCGAAC CCGATGGCCA CGATCCTTTC GGCGGCCATG 
CTGCTGCGCC ACTCGCTCGG CCTCGAAGTG GCTGCGGACC GCATCGAGGC GGCTGTTGCC 
AAGGCGCTGG CCGACGGCGT GCTTGGCCGC GACCTTGGCG GAACCGCAGG TACGACGGAA 
ATTGGTGACG CGGTGCTTGC AAGGCTGTAA
 
Protein sequence
MTSRRKKTPE KTDEGVSMKI AVLPGDGIGP EVTREAVRVI EALGLGDIEM KEAPVGGAAY 
KAYGHPLPPE TLEIARLSDG ILFGAVGDPD CDSLERHLRP EQAILGLRKA LTLFANLRPA 
RVFKGMEDFS ALRPEVAGAI DLLIVRELNG DVYFGEKGFR TAANGDREGY DVMSYSESEV 
RRIAHVAFRA AMGRKKRLCS VDKANVLETS QLWRDVMLEV AKDYPEVALE HMYVDNAAMQ 
LVRAPGNFDV VVTGNLFGDI LSDQASMCVG SIGLLASASL GERETEYGTF GLYEPIHGSA 
PDIAGKGLAN PMATILSAAM LLRHSLGLEV AADRIEAAVA KALADGVLGR DLGGTAGTTE 
IGDAVLARL