Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2604 |
Symbol | |
ID | 3917019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2815108 |
End bp | 2816343 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640445363 |
Product | major facilitator transporter |
Protein accession | YP_497874 |
Protein GI | 87200617 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACC AGAGCAATTC AGATGCCATC CGGGCAGGCG CTATCCGGAG CGCGCCGTCG CCTGCCGACG TCAACGGCTG GCCCGCCGTC GCGAGTGCCA TTCTCCTTGG CACGATCGGA GTGCTCTCGT TCATCATCCA GCCGGGGCTG GTGCAGGGCT ATGTGACACA TCTGGGCCTT GGCGAGGCCG CGGCGGTGGA CCTTGCCGGC ATCGAGATGC TGGGCGTCGC CCTTGCCACC ATCGCGCTGG CCATGTTCGG CGGGCGGGTG GACTGGCGGC ACGTGGTCCT TGCCGGTCTC GGCCTTGCCG TGGTGGGCAA TGCCGGTTCA GCCGCGACGC AGGGCGCGCT CTTCGCGCTG TTCCGGTTCG TGTCGGGCCT TGGCGAAGGC ACGATCATAT CGATCAGTTT CACGTTCGTC GGCGTGACCC GCCGGACCGA GCGCAACGTG GCGCTCTATC TCGTGCTCCT GCTGACGTAT GGCGCATTTA CCCTGTGGCA GTTGCCGGCC ATTCTCGACG CCATCGGCCT GCCGGGCCTG TTTGCCGCCT TCGCCGCGCT ATCGGCCCTG GCGGTGGTGA CGGTACCGCT TGTCCCAAGG GCCTATCACG CCCAGGAAAT GGCCAATCCC GAAGCCCGCC AGCTTTCCCG CGTCCTACTG GCGGTCGCTC TGGCCGGGGT TCTTGCCTAC AACCTTGCCC AGGGAATCGC ATGGGCCGTT CTGTTCCTTG TCGGCATCGG AGCCGGGCTT GGCGAGCAGC AGGTGGCCGA CAGCCTGTTC CTGTCGCAGG TCGTGGCGAT TGCCGGCGCG CTGGCATCGG TGTTCCTCGC CGCCAGGCTG AACCGCAACG CCGCCATCGC TTTCGGCATA CTGGTGGGCG CTGCCAGCAT TGCCCTGCTT GAAGGCGCGC CTTCGGCGGC GTTCTTCACC GTGGGCGTGT GCGGCTTCAA CTTCCTGTGG AACTTCGTCC TGCCCTTCAT TCTCGGCCGC ATCTGCGATT TCGATACGAG CGGGCGGATG ATGTCGCTTG CCATCGCCAT GCAGATGACC GGGCTGGGCG GAGGCCCCCT GCTGGCGGCG CGGCTGATCG ACGGTAACGG CTACGGTCCG GTACTGACGC TCTGCATCGG CCTGTTCATC GCCAGCTTCC TGCTGCTGCA ATTGCCCATG CGCAGGCACG GAGCGCTTCT TGCGTCCACC CCCGCTCCTG CGGCTGTCCT TTCAAACGCC ATCTGA
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Protein sequence | MSDQSNSDAI RAGAIRSAPS PADVNGWPAV ASAILLGTIG VLSFIIQPGL VQGYVTHLGL GEAAAVDLAG IEMLGVALAT IALAMFGGRV DWRHVVLAGL GLAVVGNAGS AATQGALFAL FRFVSGLGEG TIISISFTFV GVTRRTERNV ALYLVLLLTY GAFTLWQLPA ILDAIGLPGL FAAFAALSAL AVVTVPLVPR AYHAQEMANP EARQLSRVLL AVALAGVLAY NLAQGIAWAV LFLVGIGAGL GEQQVADSLF LSQVVAIAGA LASVFLAARL NRNAAIAFGI LVGAASIALL EGAPSAAFFT VGVCGFNFLW NFVLPFILGR ICDFDTSGRM MSLAIAMQMT GLGGGPLLAA RLIDGNGYGP VLTLCIGLFI ASFLLLQLPM RRHGALLAST PAPAAVLSNA I
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