Gene Saro_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2460 
Symbol 
ID3916779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2653733 
End bp2656573 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content64% 
IMG OID640445215 
Producthypothetical protein 
Protein accessionYP_497730 
Protein GI87200473 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTGA TCGTCTGGGC AGCAGTGGCC GGTGCGCTGC TCTGCTGGGT TTACGCCGAC 
TTCGAGTTCG CGGGATTCAT CGTTGGCGGG TTGTTCGGCG GTCTCATGGG CCTATGGCTT
CGATCCGCTT TGCGCGATGA AATTGCCGCA GCGGTGAACA ATGTTCTCGA TGCCCGGCTA
GAGGCGGCGA GGCGGCTGCG CGCCGAACCG GCTTCGACGC CTGCACCGGA TGCAACGGAA
CCCGCGCCGC CGCCATCTCC CCCTACTTCG CCGCCGGTGA TGCCGCAATC ACCGCAAACC
CCGGTCTCGC GCCAATCCGT GCCGGCGTCC GTACCCGCCC AGTCGCGTGA ACCTGCAGTT
GACCGGGAAG TGGCGACTGC GTCGCTTGCC GCAGGTGCGC CGACACTTCC CGAGGTATTG
TTTGCAAGCG CCCGCGACTG GTTGCTTGGA GGAAATACCA TCGTCCGTGT CGGCCTTGTC
GTGCTGTTTC TCGGGCTCGT CTTCCTCGCA AGGTTTGCCG CGATGGCGGG GCTTTATCCG
ATAGAGGCGC GGCTCGCGAC TGTCGCGGCG GTCGGGATCG CGCTGCTAGG CGTGGGCCTT
GCCAAGCGGA CGGTCAGGCG CGATTTCTCG CTCTCGATGC AGGGGGCTGG CCTTGGCGTC
CTCTACCTGG TCGTCTTTGC CGGGGCCCGC GCCTACGATG TGCTTCCTGT CGGCGCGGCG
TTCGCCTTCA TGATTCTCTT TGCCGCGCTG GGTTGCGCGC TTGCCGTCTT GCAGGATGCG
CTGGCAATGG CGCTTGCCTC GTTCCTCGGA GGTTTCGCCG TTCCCCTGCT TCTGGGCGGA
AATGCCGAAA CGCCGCTCGC CCTGTTCGGC TACATGACTA TCCTCAATCT CGCGATCCTG
TTCATCGCCT GGAAGAAGAG CTGGCGTTCG CTGAACCTAC TGGGTTTCAT TTCGACCTTC
GCGCTTGCGA CGGTGTGGGG CCTCGCGTCC TATGCAGACA GGCATTACCT GCTTTGCCAG
GTATTCCTGA TTATCTCCAT CGCCATCTAC CTCGCGGCAG CCGTGCTTTA TGCGCACAAT
ACGCCGGGAC GGCTTGGCAA CTACGCGGAT TCGACGCTGT TGTTCGGAAC CGCGCTTGCA
GGCTTCGGTC TGCAGATCGC GCTTGTCCAT GCCCGCCCGT TCGCATCGGC ATGGTCTGCA
CTGGCGTTCG GCATCGGTTA CGTTGCCTTG GCGGCGCTTC TAATGCGGCG TCGGCGTGCC
GAGATGCGAC TTTTGAACGA ATGCCTGCTC GCGATCGGGA TTGCGTTTGC CACGCTGGCG
GTGCCGCTTG CGCTGGACGT CAAATGGACC TCTGCTTCCT GGGCGCTCGA AGGTGCTGGC
GCGTTCTGGA TCGGCGCGCG ACAGGCGCGC TGGATGCCGC GTGCGTTCGG CCTGATATTG
CAGGTTGTCG CGGCGGCTCT CGCCCTCGGC TCGCTTGGGC CCAATGTTTC GGCCATTCCG
TTTGCCAACA ACGGCTTCAT GCTGCCGATG CTCGTCGCGA TCCCCGTGCT GTTCTCTGCA
TGGCTTCTGC GTCACAGGTT GGAGCATAGC GGTTCGCGCT GGGCTACCGG CTATGCGCGG
GTCGAGCATG AAATCGGAGC GGTCTGGTTT CTCCTGGGCT TCTTCTTCGT TTGCGTCGCG
CTTCTGCGCG AAGTGTCGCG CGCATTGCCG CCCGTTGTTG CGAACGAAAT GCCGGTAGGC
GCGCTCAGCT CCGGAATTCA GGTTGTGGCG GCCATGGTCG CGCTGCTCGG CGCGATGGTT
CTGGCGGACG TCTTTGGCGA TCGGAAGCAC TGGGCGGTCG CTCGCTGGCC GGGAAGGGCG
GCCTTGCCGG TCCTCTGGAT CTGCTTCCTG CTGTCGGCCG GACAGGGCAA CCACGTTCTC
GCGTGGCCGG GCGCCGTTTT CTGGCCGGCG GCGGCGGTAG GGCATGTCTG GCTGTTGCGG
CGTCAATCGG TCAACGCGTG GACCTACGCC ATGCACGTCG GCGGTGTTCT GCTGTTGACC
GCGATCGTGG CCGACAGCAT CTGGCTTGCC GTCGATCGAG CTGACCTGTG GGGCACGTCG
TGGGCCGGCG TCACATTCCT GGCAAGCGCG ACGGCCATGC TGGCGGTGCT GATGCGCTGG
GCCGGGCCAG TGGCGTCGTC CGGGACCGAC CTTGCCGACA GCTGGCCGCT TGGGGACTAT
GCTCGTGCCT ATTGGCTTCA CGCGGGGATC GTCCTTGTGC ACCTCGTGTA CTTCGGCGCG
CTGGCAACGA CCGTGATCGC CGAAGGTATT GCCGATCCGC TGCCATATGT GCCCGTGCTC
AACCCGGTCG ACCTGTCTGC GCTGCTCGCG CTCGTCGTGC TGCTGCTGTG GGGACGGCTG
TTGCTGGGTG CCGTGAAGGA CGCGCCGATG CTGGTTGAAT TGGCCGCCGA CAAGGCCGGC
ATGGTTGCGT TGGCCGTACT CGCCTTCGTC ATCGCCAACA CCATTTGGCT GCGTACAGCC
CATCATTTTC TCGGGGTCGC CTGGGACAAT GCCGCGCTTG CTGAAAGCCA GGTCGTCGAG
GCCGGGATCT CGCTGTTGTG GACGCTCATC GCGATGGCGC TCATGTTCCT CGCGCGGAGC
CGCCAGCAGC GATTGCCGTG GCTGGCGGGC GCTTCGCTTC TCGGTGCGGT GGTGCTCAAG
CTGGTGTTCG TCGATATGTC CGCCGTGGAA GGCCTGGCAC GGATCGTCGC CTTCATCGGC
GTTGGCGTGC TGATGTTGCT GATCGGCTAT TTCGTGCCTC TTCCGCCCCG TCGTGAAGCG
GGCAAGGAAG TGGCAGCATG A
 
Protein sequence
MGLIVWAAVA GALLCWVYAD FEFAGFIVGG LFGGLMGLWL RSALRDEIAA AVNNVLDARL 
EAARRLRAEP ASTPAPDATE PAPPPSPPTS PPVMPQSPQT PVSRQSVPAS VPAQSREPAV
DREVATASLA AGAPTLPEVL FASARDWLLG GNTIVRVGLV VLFLGLVFLA RFAAMAGLYP
IEARLATVAA VGIALLGVGL AKRTVRRDFS LSMQGAGLGV LYLVVFAGAR AYDVLPVGAA
FAFMILFAAL GCALAVLQDA LAMALASFLG GFAVPLLLGG NAETPLALFG YMTILNLAIL
FIAWKKSWRS LNLLGFISTF ALATVWGLAS YADRHYLLCQ VFLIISIAIY LAAAVLYAHN
TPGRLGNYAD STLLFGTALA GFGLQIALVH ARPFASAWSA LAFGIGYVAL AALLMRRRRA
EMRLLNECLL AIGIAFATLA VPLALDVKWT SASWALEGAG AFWIGARQAR WMPRAFGLIL
QVVAAALALG SLGPNVSAIP FANNGFMLPM LVAIPVLFSA WLLRHRLEHS GSRWATGYAR
VEHEIGAVWF LLGFFFVCVA LLREVSRALP PVVANEMPVG ALSSGIQVVA AMVALLGAMV
LADVFGDRKH WAVARWPGRA ALPVLWICFL LSAGQGNHVL AWPGAVFWPA AAVGHVWLLR
RQSVNAWTYA MHVGGVLLLT AIVADSIWLA VDRADLWGTS WAGVTFLASA TAMLAVLMRW
AGPVASSGTD LADSWPLGDY ARAYWLHAGI VLVHLVYFGA LATTVIAEGI ADPLPYVPVL
NPVDLSALLA LVVLLLWGRL LLGAVKDAPM LVELAADKAG MVALAVLAFV IANTIWLRTA
HHFLGVAWDN AALAESQVVE AGISLLWTLI AMALMFLARS RQQRLPWLAG ASLLGAVVLK
LVFVDMSAVE GLARIVAFIG VGVLMLLIGY FVPLPPRREA GKEVAA