Gene Saro_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2387 
Symbol 
ID3915732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2550202 
End bp2553357 
Gene Length3156 bp 
Protein Length1051 aa 
Translation table11 
GC content67% 
IMG OID640445142 
Producthypothetical protein 
Protein accessionYP_497657 
Protein GI87200400 
COG category[S] Function unknown 
COG ID[COG4995] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAACC GTGGAGCAAG AAACTGGGCT GCGCTGGCGG CAGGAGTTGC CGCCCTTGCG 
CTGGCATCGT CCGCATCGGC GGCGCCAGAC CAATCGCTGA TGTTGCGCGA CAGTTTCCCG
CTGGGGTCGG GCGGCAGCAA GGCGCTGTGC CAGGTCCAGT CGCGCGTGGT CGATCCAGCG
AACCGGAGTC CACTGGACCG GACCTGGGCG GTGGTCTGCC GCGATTCGGC GCTACCTGTC
GGCTACGTGT TTGCGCTGCG GCAGGGTGAA GGTGACGTGA TGGCCCGCCT GGCCGAGCGG
CGCCGCGCGC AGGTCGATTG CGCCGCCGCG ACGAGTGCGT CGGTCGCGGG TCGTATGCGT
CAGGATTGCC GGTGGAAGGA CCCCGAGCTC GCCTATGAGG TCGTCAACGT GAATCGCGGC
AAGACGAGCT ATGTGGTGGA GGGCTTCTCT GCCTATCACG GGGCGCTCGA CCTTGCCTTG
CGTTCGATCT TCGAGGACCG GCCGATCGAC GAGCCGATCG AGGTGGCGAC GACATCGGTC
AACGACACCG AAGCCTATGC ACGCATCCAG GCGCTGACGC TCGACCCGTC GACCGCGCTG
GCCGAAGGGT ACCGGCGCAA CAATTCGGGC GACTATGCCG AGGCCGCCGC GTACTTCGAG
ACGCTGGACC AGCGGCAGGC GTCGACCGGA GACGTGCCGA TCGACCGCGT CGAATTTCTT
GTGAACGCCG GACTTCAGCG TTCGAACCTC GGTCAGTTCG CGGAGGCGGA TCGCCTGTTT
GCCGAGGCCG ACGCGATGCC CGCGGGCAGC GGCGTGGTGG AGCGGCTGCG GCGCAACTAC
GAGGCGATCC ACCTTCTCAA CCAGGAGAAG TACGCCCAGG CGCTCGAGCG GATCGACGCG
CCGCTGCGGC AGACAAGCGC GATGGGCGCG GAGACGTTGC GCGACACGAT GGAACTGACC
CCGTCGGTGG CGCGGCGCAT CAATGCGTCG GACGTGACCG CCAATGCCAT GGGCATGGTC
GACGACTTGC GCCTGACCGA CGACGAGCGC GCGACGATCC TCGATGCGCA GACGCTCCAG
CTCAAGGGCA CGGCGCTGCG CCTGCAGGGG CGGCGGACCG AGGCCAAGGC CGCGCTCGAG
CAGGCCCAAT CGCGCGCGCT GGCGGTGCGT AACGGGCGTG TCGTCTCGAT CGTGCGGATG
CGGGCGCAAC TGCTGACGGA GCTTGCGACG CTGGCCGAGG ATGAAGGTCG CGTTGGCGAT
GCGGAAGGGC TCTTGCGCTC GGCCGTGGAC ATCGTGGGCG TCCAGTATCC CGATACGCGC
AGCCTTGCGG CGGCGCAGGC GCGGCTCGCG GCGTTCCTTG TGCGGCACGA CAAGGCGGAT
CAGGCCGAGC CGCTGTACCG CGAAGTCGTG GCGCGTTCGG TCGAGCGGGA GAACGGTCTT
TCGGGCCTCT CGCGCCAGAT GGCCCCATAC TTCGACCTGC TGGCCGGGAA GATGGGCACC
GATGCGGGGG CGAGCGATGC CTTCTTCGTC GCCTCGCAAG TGCTGGTACG GCCGGGCGTG
GCGGAAACGC AGGCCGTTCT CTCGCGCGAG CTTTCGGGCG GAAGCGACGA GGCGGCCAGG
CTTTTCCGGC AATCCAACAG CCTGACGCGC GGGATCGAGC GGGCGCGCAT GACCTATGCC
GCGCTGCAGA GGCTGGACGA TGCAGCCGCG CGCACGGACG AGATCGCGGA AGCGGCAAAG
CGGGTACAGG AGCTTGAAGC GCAGGAGCAG GCGACGGTTA TCCAGCTTGC CAACTATGCC
CGCTACCGCG TTGTTTCGCA GCGGGTCATC GGCCAGAAGG AATTGCAGGA CGGCCTTGGT
GCGGGCGAGG CCTATGCCAA GGTGGCGGTG CTCGGTCCGG ATGTCTTCGT GTTCTTTGCG
AACAAGGACA AGGCCGTGGG CTACCGCGCG CCGATCACTT CGGGCGAGCT GGAGAAATCT
GTCCAGTCGA TCAGGGATTC GATCTCGCGC TACGACGGCA AGCAGTACGT TACGAGCGAA
TTCGCGGCCG CCGAGGCCTA TGGCGTCTTC AAGGCACTGT TCGGGCCGGT CGATGCGGAA
CTCATGGCCG CGCACCACCT GATCTTCGAG CCGGACGGGG CGATGCTCAA GCTGCCGGTC
AACGTGCTTG TAGCCGACGA CGCGTCGGTC AAGGCCTACC TCAAGCAGGC GGAGAGCCCA
TCGGGCGACC CGTTCGACCT GCGGGGTATG AACTGGCTGG GCAAGGACAA GCTGGTCTCG
ACCGCCGTTT CCGCCCGCTC GTTCATGGAT GCGCGCAAGC AGCCGGGGTC GAAGGCGCGT
GAAGCCTATC TCGGTCTTGG CCGGAATGCG GCCATTTCGG CGAGCAGCAC GCTTGGCGCG
GCACGGGTGC GCGGCGCGGA CGGAGACATG ACGGCAGACT GCAACTGGCC GCTCGCGACC
TGGAATCGGC CCATTTCCGA GGCCGAGCTG CTGAAGGCGC GGATGCTGCT GGGATCGCAG
GGGACCGACA TCATGGTCGG CCCGGCCTTT TCCGACACGG CGATCAAGTC GCGCCCCGAC
CTCGACAACT TTCGCATCCT GCACTTTGCC ACGCATGGCC TCGTGACGCC GCCGCAGCCG
ACCTGTCCGG CTCGGCCGGC GCTGGTCACG TCCTTCGGTC CCAAGGGATC GGACGGACTG
CTCAGCTTTT CGGAGATTTT CGACCTCAGG CTAGACGCCG ACATGGTGAT CCTTTCGGCC
TGCGACACGG CGGGTCAGGC AGACGTTGCC GCCACGCGCG CGGCGGGCAT CGTAACCGGC
GGCGGATCGG CTCTGGAGGG GCTGGTGCGC GCGTTCATCG GTGCGGGGAG CCGTTCTGTC
CTCGCCAGCC ACTGGCCAGC CCCGGACGAT TTCGATGCCA CCGCGCGCCT TATCAACGGC
CTGTTCGAAG CGCCTCCGGG TACCTCGTCG GGCGAGGCCC TGCTCAAGGC GCAGCAGGCG
CTGATGGCGG ACGCGGACAC TTCGCATCCC TATTACTGGG CCGGATTTGC GGTTATCGGT
GACGGTGCGC GGCCGCTTGT TTCGCGGGAC GCGCGCGTGG CAATGAAGGC GACCGGCATG
GCCGCTGGAC CGGCCAAGGT TTCGGGGGGG AACTGA
 
Protein sequence
MRNRGARNWA ALAAGVAALA LASSASAAPD QSLMLRDSFP LGSGGSKALC QVQSRVVDPA 
NRSPLDRTWA VVCRDSALPV GYVFALRQGE GDVMARLAER RRAQVDCAAA TSASVAGRMR
QDCRWKDPEL AYEVVNVNRG KTSYVVEGFS AYHGALDLAL RSIFEDRPID EPIEVATTSV
NDTEAYARIQ ALTLDPSTAL AEGYRRNNSG DYAEAAAYFE TLDQRQASTG DVPIDRVEFL
VNAGLQRSNL GQFAEADRLF AEADAMPAGS GVVERLRRNY EAIHLLNQEK YAQALERIDA
PLRQTSAMGA ETLRDTMELT PSVARRINAS DVTANAMGMV DDLRLTDDER ATILDAQTLQ
LKGTALRLQG RRTEAKAALE QAQSRALAVR NGRVVSIVRM RAQLLTELAT LAEDEGRVGD
AEGLLRSAVD IVGVQYPDTR SLAAAQARLA AFLVRHDKAD QAEPLYREVV ARSVERENGL
SGLSRQMAPY FDLLAGKMGT DAGASDAFFV ASQVLVRPGV AETQAVLSRE LSGGSDEAAR
LFRQSNSLTR GIERARMTYA ALQRLDDAAA RTDEIAEAAK RVQELEAQEQ ATVIQLANYA
RYRVVSQRVI GQKELQDGLG AGEAYAKVAV LGPDVFVFFA NKDKAVGYRA PITSGELEKS
VQSIRDSISR YDGKQYVTSE FAAAEAYGVF KALFGPVDAE LMAAHHLIFE PDGAMLKLPV
NVLVADDASV KAYLKQAESP SGDPFDLRGM NWLGKDKLVS TAVSARSFMD ARKQPGSKAR
EAYLGLGRNA AISASSTLGA ARVRGADGDM TADCNWPLAT WNRPISEAEL LKARMLLGSQ
GTDIMVGPAF SDTAIKSRPD LDNFRILHFA THGLVTPPQP TCPARPALVT SFGPKGSDGL
LSFSEIFDLR LDADMVILSA CDTAGQADVA ATRAAGIVTG GGSALEGLVR AFIGAGSRSV
LASHWPAPDD FDATARLING LFEAPPGTSS GEALLKAQQA LMADADTSHP YYWAGFAVIG
DGARPLVSRD ARVAMKATGM AAGPAKVSGG N