Gene Saro_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2296 
Symbol 
ID3916614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2439162 
End bp2439830 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID640445052 
ProductNADH-quinone oxidoreductase, E subunit 
Protein accessionYP_497567 
Protein GI87200310 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC GCTTTATCGA ACCCGACAGC CCCGAACTGC GCGCGCGCTG GGGTGGCTTC 
GAGTGGACGC CCGAGAACGC CGAGAAGGCG AAGCAGATCG TCGCCCGCTA TCCGGCCGGA
CGCCAGCGTT CGGCGGTGAT GCCGCTGCTC GACCTTGCGC AGCGCCAGGT CGGTGCGGAA
CTGAACACGC AAGGCTGGCT GCCGATCCCG GTGATGGAAT ACGTGGCAAG CTACCTCGAC
ATGCCGGTTA TCCGCGTGGT CGAGGTGGCG ACGTTCTACA CGATGTACAA CATCGCCCCG
ATCGGCCGTT TCCATGTGCA GGTGTGCGGC ACCACGCCGT GCATGTTGCG CGGTTCGGAC
GACATCCTCG CCGCCTGCAA GGGCAAGGGG CTGAAGAAGG GCCACACCAC GCCGGACGGC
ATGTTCACGC TGACCGAGGT CGAGTGCATG GGCAATTGCG CCTCGGCGCC GATGGTCCAG
ATCAACGACG ACAACTACGA AGACCTGACT GCCGCCGACA TGGAGCGCAT CCTTGACGAG
CTGGCTGAGG GCAAGCAGCC GAAGACCGGC ACGCAGCTTC CCGGTCGTCA CACTGTCGAG
CCGGCGGGGG CGCTCAGCAA CCTGACCGCG ATGGTGACCG AGAACCACGA CTATCGGGGG
GAGTGGTAA
 
Protein sequence
MADRFIEPDS PELRARWGGF EWTPENAEKA KQIVARYPAG RQRSAVMPLL DLAQRQVGAE 
LNTQGWLPIP VMEYVASYLD MPVIRVVEVA TFYTMYNIAP IGRFHVQVCG TTPCMLRGSD
DILAACKGKG LKKGHTTPDG MFTLTEVECM GNCASAPMVQ INDDNYEDLT AADMERILDE
LAEGKQPKTG TQLPGRHTVE PAGALSNLTA MVTENHDYRG EW