Gene Saro_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2208 
Symbol 
ID3916709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2348519 
End bp2352760 
Gene Length4242 bp 
Protein Length1413 aa 
Translation table11 
GC content64% 
IMG OID640444963 
Productputative methylase/helicase 
Protein accessionYP_497480 
Protein GI87200223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACT CTTCCCTCGC TTTCGCATTC GATCCACCAT CGCCGCCGCT TGTCGTGACA 
GCAGCCAATG CAATGGCGCT GCAATTGGCA GCAGGCAGCG CGCTTTCGCG CAGCGACATC
AACCGCATCA TGACGGACCA CTTCGGCGGA ACCGATGCAC TCGGGGCATG GTCAGTCCGT
GATGCTCACG CTGCGCTCGA GCTGGCGCAG GTTCAACACC TGCAAGCATC AGATCAAGTC
CAGCCCACGA GCCCGATCGA CGAGGCGGAA CAGTTCTTCT GCGGTCTCGA TGCCCGAATT
CCGACCCAGA CCAATCGCAG CGACGAGCAG ATCGAATGGC AGCAATTCGC GACGCCGCCG
CGCCTTGCCT GGCTCGCTGC CCGGGCTTGT GCGATGGGTG GAGATGAGCT CGCGCTCGAA
CCTTCGGCCG GTACCGGCAT GCTCGCAGTC TGGGCTGTCA AAGCCGGTGC GCGCCTTGCC
TTGAACGAAA TCTCGCCGCT GCGCCGCGAC TGTCTGACTG CTGTGTTCCC GGCTGCCCGC
GTGACCGGAC ATGATGCCGA GCTGATCGAC GAACTGCTCG ATCCGGCCAT CAGCCCCAGC
GTCGTTCTGA TGAACCCTCC CTATTCCCAC GGCATTGAGC GAGGGCACGA TAGTCGCGCT
GGCTCGCGCC ATCTGCGGTC GGCCTGGAAC CGTCTGGCGT CCGGGGGGCG GCTTGTCGCG
ATCATGCCTG AATGGTTCGA CTGTGCGAAG TTCCTGGCGT GGCTGAAGGG ACCGATCTCG
CTGCGGCTCA ATGCCGCCGT CGAACGCGCG TTCGTCAAAC AGGGCACCGG CATCACCACG
CGGCTGTTGG TCTTCGACAA GGTGGAAGGC TCCAATGAGC CTGTCGCTAT CCGCACAAAC
GACTTTCGCC AGCTGGTCGA TATTGTCGAT GCCTTGCCGG ATCGCGCCAT CTTGGATGCC
GTTCCCGAGC AATCGAGCCT CCCGGCTCGT GCGCCGTTTC GCCTGGTGGC GGTGCCGCGC
AGGCCGCTGC CGACACCAGC CAGGATCACG CCCCCAGCCT CCGCCATCGG GTCGCTCACC
TATCAGTCGC TCGAAACCCC TGCGCGGCTT GCCCCTCAGG TTGGCCACTA TCTGCCCTAC
CGCCCGAGCA GGATCGTCAT CGATGGCGCG GCCGAGCATC CGACGCCCCT CGTTGAGTCA
GTCGCAATGG GGTCGATCGC TGCACCCAAG CCGGACGCGG TGCCGCAGCT GCCTGACGGA
CTTATCGCCA AAGGGTTGCT ATCGAATGCC CAGGCAGAGA CCCTGATCTA CGCCGCCAGC
GCTCACGGCC GCGATCTTCC CGGCCGGTTC GAGCCCGAGG ACAAGGGCTG TTCGCTCAAG
GCTTCGGCGG AAGGACATAC CTACCGGCAG GGCTATTTCC TTGGGGATGG CACCGGCGCT
GGTAAAGGCC GCCAGGTCGC AAGCGTCATT CTCGATCGCT GGGTGCACGG CGAACGCCGC
CATATCTGGA TTTCGAAGAA CGAGGCGTTG CTCGAAGATG CCCGGCGCGA CTGGGCTGCG
CTTGGCGGCC TCCCGATCGA CATCCAACCT CTGGCGTCCT GGAAACTCGG CACCTCCATC
GCGATGCGCG ACGGGATTCT CTTCGTCACT TATCCAACCC TGCGTTCAGG CCGGAGCGAC
GCAACGCGGC TTGACCAGAT CCTCGCCTGG GCCGGTGAAG ACTTCGACGG CGTGATCGTG
TTCGACGAAG CGCACGCCAT GGCCAACGCC GCTGGCGGCG AAGGATCGCG GGGCAAGGTC
AAGGGATCGG AACAGGGTAT CGCTGGCGTC CGCCTGCAGA ACCTCCTGCC CCGGGCAAGG
GTGCTCTACG CTTCGGCAAC TGGTGCGTCC GACGTCAACA ACCTCGCCTA TGCGACCCGC
CTCGGGCTCT GGGGTCCGGA GACCGCTTTC GCCAATCGCG AGACTTTCGT TGCCGACATT
CGCGACGGCG GCATCGCCGC GATGGAGCTG GTCGCGCGAG ATCTCAAATC GCTTGGCCTC
TACACCGCGC GTGCGCTCTC CTTTGCAGGC GTCGAATATG AGATCCTCGA GCATTGCCTG
ACCGAAGATC AGATCGCGGT CTACGATGCC TATGCAGAAG CCTGGGCGAT CATCCACGCC
AACCTGCGCG ACGCGCTGGA GGCCACGCGA ATTGTCGACA GCGAGACCGG GGGCACGCTC
AACTCGGGCG CCAAGTCCGC AGCTTTGTCG ATCTTTGAGG GAACCAAGCA GCGCTTCTTC
GCGCAGCTGC TTCTGTCGAT GAAGCTCCCG AGCTTGCTGC TTGCGATCGA TACGGCGATT
GCCGACGGTC ACGCTGTTGT CGTCCAGCTG GTGTCGACGG CAGAAGCCAT GCTCAACCGC
CGGCTTGCCG ACCTGTCTGA CGAGGAGCGG GAAGCTCTCG AGATCGACCT GTCCCCTCGG
GAATATGTGA TCGACTATCT CGCCAAGAGC TTTCCTGTTC GCCTGATGGC AGTGTTCACC
GACGAAAACG GTAATCCTCG CTCCGAGCCG ATGAGTGATG AGCAAGGCGC ACCGGTGCTC
TGCCGCTCCG CACTTGCCGC GCGCGACCGG ATGATTGAGC AGCTCTGCGC CTTGCCGCCC
ATCGCCACTG CACTTGATGC CATCATCGAA CGCTTCGGCG TTGATCAGGT GGCGGAAGTC
ACTGGCCGGA CGCGTCGGCT GATCGTCGGC CGCGACGGTC GCCAGAAACT CCAATCCCGC
TCGCCGCGCG CCAATGTCGC CGAGACCCAG GCCTTCATGG ACGGCGCGAA GCGCATCCTG
GTGTTCTCCG ATGCCGGAGG AACGGGGCGC AGCTACCATG CTGATCTGGC CGCGAAGAAC
CAGGCCCGCC GCGTCCACTT CCTGCTCGAG CCGGGCTGGC GGGCTGACGC CGCAATCCAG
GGGCTCGGCC GGACCAATCG CACCAATCAG GCATCGGCCC CGCTGTTCAG GCCCGTGACG
ACAGATGTGC GCGGCGAGCG CCGCTTCATC TCGACAATCG CGCGACGACT CGACAGCCTC
GGCGCTCTGA CCCGCGGGCA GCGCCAGACC GGCGGGCAAA ATCTGTTCGA TCCTGCCGAC
AATCTCGAAA GCATCTACGC CAAGGAAGCG CTCCATCGCT GGTTCGGCCT CTTGTTCACC
GGCAAGCTCG AGGCGGTCAG CCTTGAGCGC TTCCAAGAGC TGACAGGCCT TTGGATCGAA
GCGCCTGACG GGTCGATGGT CGATGACCTG CCGTCGATCC AGCGGTGGTT CAATCGCATC
CTGGCGCTTC CCATTGCCCT GCAGAACGCG ATCTTCGATG AGTTCATGGG GCTGGTCGAA
GCGCGCATCG ATGCCGCCCG GCAGGCCGGC ACGCTCGATC TCGGCCTCGA GACGATTGCA
GTCGAGGATT TCACGGTCCT GTCCGACACG CTGCTGCGCA CCGATCCGGC ATCGGGCGCG
ACGACCCATC TCCTCGAACT GGAAATCGCC AGGGCCCTGA AGCCGCTCAC GCTGACGCGG
CTCGAGGAGC TTCACGGCCT CGCTGGGCAG CGGCAGCGCC CGGTTCGTAA TGCCCGCTCT
GGTCGGGTCG CCTTGCTGGT GCCCGCCCGC AGTATTCTTG CTGATGACGG CAAACGCGTT
TCCCGCTTCG AACTGCTGCG GCCCTTGAAG CGCAGTCACA TCACCGAGGA CCAGCTCGCT
GAGAGCAGCT GGGAGGCAAT TTCCGTCGAC GCTTTCCGCC AAGCTTGGGC GGCCGAAGTT
GAGGAAGCGC GGACCAGCCA TAAGCGCGAG CGCCTATATC TTGCGGCGGG CCTTCTGCTG
CCGGTCTGGG ACAAGCTGCC TTCGGACTTC GTTAGGGTCA GTCGCATCTC AGCGGCGGAT
GGCCGGTCGC TCCTTGGCCG GGAGGTTCCT CTCCATTGTG TTCCGGACCT GTGCCGGACG
CTGGGTCTGG AACGCGAGCA AACGCTTTCC GCCGACGACA TCGTCCAGAC CGTCCTGGCG
ACGGGCCGAG CCATGGAATT CGCGGGACGC GAGCAGCTCA TGGTCAAACG CAGCCTGGTC
AATGGCTCAC AGCGAATTGA GCTTACGGGA TGGAGTGCTG GTCGGCTCGA CTGGTACAAA
GCCCAAGGCT GCTTTACCGA GATCATCCGC TATCAGACCC GGCTTTTCGT GCCGATCGAA
GGCGCAGTGA GCGTGATTGC CAGACTGGCA TCATCAGCAT AG
 
Protein sequence
MSNSSLAFAF DPPSPPLVVT AANAMALQLA AGSALSRSDI NRIMTDHFGG TDALGAWSVR 
DAHAALELAQ VQHLQASDQV QPTSPIDEAE QFFCGLDARI PTQTNRSDEQ IEWQQFATPP
RLAWLAARAC AMGGDELALE PSAGTGMLAV WAVKAGARLA LNEISPLRRD CLTAVFPAAR
VTGHDAELID ELLDPAISPS VVLMNPPYSH GIERGHDSRA GSRHLRSAWN RLASGGRLVA
IMPEWFDCAK FLAWLKGPIS LRLNAAVERA FVKQGTGITT RLLVFDKVEG SNEPVAIRTN
DFRQLVDIVD ALPDRAILDA VPEQSSLPAR APFRLVAVPR RPLPTPARIT PPASAIGSLT
YQSLETPARL APQVGHYLPY RPSRIVIDGA AEHPTPLVES VAMGSIAAPK PDAVPQLPDG
LIAKGLLSNA QAETLIYAAS AHGRDLPGRF EPEDKGCSLK ASAEGHTYRQ GYFLGDGTGA
GKGRQVASVI LDRWVHGERR HIWISKNEAL LEDARRDWAA LGGLPIDIQP LASWKLGTSI
AMRDGILFVT YPTLRSGRSD ATRLDQILAW AGEDFDGVIV FDEAHAMANA AGGEGSRGKV
KGSEQGIAGV RLQNLLPRAR VLYASATGAS DVNNLAYATR LGLWGPETAF ANRETFVADI
RDGGIAAMEL VARDLKSLGL YTARALSFAG VEYEILEHCL TEDQIAVYDA YAEAWAIIHA
NLRDALEATR IVDSETGGTL NSGAKSAALS IFEGTKQRFF AQLLLSMKLP SLLLAIDTAI
ADGHAVVVQL VSTAEAMLNR RLADLSDEER EALEIDLSPR EYVIDYLAKS FPVRLMAVFT
DENGNPRSEP MSDEQGAPVL CRSALAARDR MIEQLCALPP IATALDAIIE RFGVDQVAEV
TGRTRRLIVG RDGRQKLQSR SPRANVAETQ AFMDGAKRIL VFSDAGGTGR SYHADLAAKN
QARRVHFLLE PGWRADAAIQ GLGRTNRTNQ ASAPLFRPVT TDVRGERRFI STIARRLDSL
GALTRGQRQT GGQNLFDPAD NLESIYAKEA LHRWFGLLFT GKLEAVSLER FQELTGLWIE
APDGSMVDDL PSIQRWFNRI LALPIALQNA IFDEFMGLVE ARIDAARQAG TLDLGLETIA
VEDFTVLSDT LLRTDPASGA TTHLLELEIA RALKPLTLTR LEELHGLAGQ RQRPVRNARS
GRVALLVPAR SILADDGKRV SRFELLRPLK RSHITEDQLA ESSWEAISVD AFRQAWAAEV
EEARTSHKRE RLYLAAGLLL PVWDKLPSDF VRVSRISAAD GRSLLGREVP LHCVPDLCRT
LGLEREQTLS ADDIVQTVLA TGRAMEFAGR EQLMVKRSLV NGSQRIELTG WSAGRLDWYK
AQGCFTEIIR YQTRLFVPIE GAVSVIARLA SSA