Gene Saro_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2169 
Symbol 
ID3918834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2307355 
End bp2310057 
Gene Length2703 bp 
Protein Length900 aa 
Translation table11 
GC content62% 
IMG OID640444924 
ProductTraG-like 
Protein accessionYP_497442 
Protein GI87200185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAGA TTTTCACGGT CGGCGGCGGG GACTATCTGG TCAACGTCTT CCAGGCGGTC 
GCCGCCTGGA CCGGCAACGG GGGCTACAAG AGCCTGCTCC AGGTGGTGAT GGTAATGGGG
CTTGGCCTGT CTGCCCTGAC CCTTGCGTTC AACCAGGACT GGCGCGCCTG GATCAACTGG
TTCCTCGGCG CAACGCTCAT CTACTCCTGC CTAATGGTGC CGCGGCTCGA GGTCCATGTG
ACCGACCGGC TCAATCCGAG CCTTGCCCCG GCCAATGTCA GCAACGTGCC GCTGGGCCTG
GCCTTGATGG CGAGCTTTAC CAGCCAGGTC GGCGACTATC TGACGGGCTC GGCAGAAGTG
GTGTTCGGCC TGCCCGGAGA TCTCAACTAT TCGAAAAACG GGATGATCTA CGGCGCGCGG
CTCTACGATG CGACCCGGTC CTTGCGGATT TCCGATCCGG AGTTTGCTGC CAATCTCGAC
GAGCATTTCC GGCAATGCGT GTTCTACGAC GTCCTGCTCG GCCGCTACTC GATGAAGGAG
CTGGCAGAAA CCGGCGACAT CTGGGCGACG ATCGCGCCGG GAAGCCAGGC GCGCGCACAG
CGCTTCCTGA CCCGGGATGC CACTTCAGGC CAGGTGAGCT CGAACATCGT GACCTGCCGC
GAGGCCTACG ACACGCTCAA TGCGCAGTGG GCCGGCCTCG TCGATGCGAT GGGATCGGTG
TTCGGCCGTC AGCTTTACCC CAACCAGACG ACCGCGCTCG CCAAGGCGAA GCTCTTTGCC
GACCTGCCAG TGGCCTATCA GTACCTAACC GGCGTCTCGG CCAACGCGAC CGAAATCTTC
AAGCAGACGC TGACTATCAA TGCGATGAGC CAGGCGATGC ATTCGATGTC CGGCACCAGC
GGCGCGGGCA ATGTCGACGT CTACGCCCAG ACCCGCGCCG ACATTCAGAC CGAGCGGACC
TATGGCTCGA TTGCGAGCAA CGCCATGAAG TGGGTCCCAC TCCTGAACGT CGTGCTGACC
GTGCTGTTCT ATGCGCTGTT TCCGGTGCTC TTCCCGCTCT TCCTGCTCCC CAAGACGGGA
CCTGTCGCAC TCAAGGGCTA TGTGACGGGC TTCTTCTATC TCGCGGCCTG GGGGCCGCTG
TTCGTGATCC TCCACATGAT GCTGATGTAC AAGGGCGCGG CCGACATGAG CGCGGTCACA
GGCAGCAACG GCCTCAGCCT GGCGAGCTTT ACCGGAATGG CCGACGTCAA CAGCGATATC
GGTCTGCTGG CCGGCTATCT CATCGCATCG GTGCCGTTCC TGGCAGGCGG TGTGGCCAAG
GGCGCCATGG CGATTTCCCA CCACGCCACG AGCTACCTCA ATCCGAGCCA GAACGCGGCC
GAGGAAGCGG CCCGGGAGGC GAGTACCGGC AACGTCTCGC TCGGCAACAC CAGCTTCGAA
AACTCGAGCG TCCTCACCCG CCAATTCGCA CAAGGCACGA TCGCGCCAAG CTTCACGTAC
GGCGCGCCGC AGACGCGGAC CTTCAGCGAC ACCGGGGCAA TGACCACGAG CTTTCCGGAC
GGCAGCTACG ACCAGATCCC GACCTCCAGC TATCCCTTCA CGCCGACGCT GGGCCAGGAA
TTCACGGCGC GCCTTTCGAC GATGGCATCG CAGGCCCGCG CCAACAGCGA GAGTTATACC
AATTTCGCAA CGGAATCGAC GACCAGCGCG GTCACGAAGT TCCGCGAGCT CAGGGACCAG
TTCAGCCGGG GCGCATCCTT CGAGAGCGCG ACCGGTACCT CGAATTCCGA CAGCATCCAG
ACCGCATTCA GCGAGGTCGA TCAGGCATCG ACCAGTCTGC AGCGGCAATT CGGGCTGTCG
CGCAGGGTCG CAGATGACAT CTCTACCGCT TGGTTCCTGG GTGGCGAGGC CGGGGCAAAA
GCTGGGATTT CTAATGGCGT GCTCTCGGGA AGCGTAGGAG CGAAGGGCGG TGGGACACGC
ACATGGACCG ACAGCGACAT CGGTATCGCA TCCGAAGACC GCTCACGCAT CTTTGGGAGC
CTGTCCCAGA TGTCTGACAG CCGCAATTGG TCGAGCACCC GCGATGGGTT CGTTCGCTCA
GTCAGCACTT CATCAAGCTC GTCGATCTCG AGCACCGCGA GCGGCATGAA CGCATCTCTG
ACAGAAGCCC AGAGCTTCAC AATCGAAGCT CGTCGGGCCG AGGAGCTTGC CAATCGTCTC
GAGAGCCAGG CTTCTTTCTA CGAAGGAAAC AGCGCTGCAG GCAGCCTCAA TTTGTCCCAA
GCCTACCGCG AATGGGGTCT CGCCGAGATC GAAAGCAACC GCGATTTCTA TGGCAATGCG
CGGTTCGACG ATGTCACGTT CCAGCTCAGC CCGGAAGGCC AAGCATTGCA GGCAAAGTTC
ATTGAAAGTT ATGCCGAGCA GCTTCGCGAC GGAATCGACG ATCGCCTCGT ACTCGTCCCC
GGACAGCCCG TATCCCGACC GGCTATCTCA AGCGCGGGCT CAGTGCGCGG CCGGGCACAG
ACCGGCGGCG GGGGTTCCGA TTCAGTGCCC CGCGTGGGTG CCGGCAATCT TCATGAAGAG
GTGCAAAAGG CTCAGGCGGC CGGTCGCCAG AAGATTACCG GCTCTAGGGG ACGTCTAGAC
GCGATCACCA AGGGAGCCCA AGGTGCCAGT GCAGAAGCAG CCGATGATGT GAAGGAGTGG
TGA
 
Protein sequence
MVEIFTVGGG DYLVNVFQAV AAWTGNGGYK SLLQVVMVMG LGLSALTLAF NQDWRAWINW 
FLGATLIYSC LMVPRLEVHV TDRLNPSLAP ANVSNVPLGL ALMASFTSQV GDYLTGSAEV
VFGLPGDLNY SKNGMIYGAR LYDATRSLRI SDPEFAANLD EHFRQCVFYD VLLGRYSMKE
LAETGDIWAT IAPGSQARAQ RFLTRDATSG QVSSNIVTCR EAYDTLNAQW AGLVDAMGSV
FGRQLYPNQT TALAKAKLFA DLPVAYQYLT GVSANATEIF KQTLTINAMS QAMHSMSGTS
GAGNVDVYAQ TRADIQTERT YGSIASNAMK WVPLLNVVLT VLFYALFPVL FPLFLLPKTG
PVALKGYVTG FFYLAAWGPL FVILHMMLMY KGAADMSAVT GSNGLSLASF TGMADVNSDI
GLLAGYLIAS VPFLAGGVAK GAMAISHHAT SYLNPSQNAA EEAAREASTG NVSLGNTSFE
NSSVLTRQFA QGTIAPSFTY GAPQTRTFSD TGAMTTSFPD GSYDQIPTSS YPFTPTLGQE
FTARLSTMAS QARANSESYT NFATESTTSA VTKFRELRDQ FSRGASFESA TGTSNSDSIQ
TAFSEVDQAS TSLQRQFGLS RRVADDISTA WFLGGEAGAK AGISNGVLSG SVGAKGGGTR
TWTDSDIGIA SEDRSRIFGS LSQMSDSRNW SSTRDGFVRS VSTSSSSSIS STASGMNASL
TEAQSFTIEA RRAEELANRL ESQASFYEGN SAAGSLNLSQ AYREWGLAEI ESNRDFYGNA
RFDDVTFQLS PEGQALQAKF IESYAEQLRD GIDDRLVLVP GQPVSRPAIS SAGSVRGRAQ
TGGGGSDSVP RVGAGNLHEE VQKAQAAGRQ KITGSRGRLD AITKGAQGAS AEAADDVKEW